-----------------------------------------------------------------------------
- Banjo                        Bayesian Network Inference with Java Objects -
- Release 2.2.0                                                 15 Apr 2008 -
- Licensed from Duke University                                             -
- Copyright (c) 2005-08 by Alexander J. Hartemink                           -
- All rights reserved                                                       -
-----------------------------------------------------------------------------
- Project:                                                          Fall 2019
- User:                                                       Bernardo Jordan
- Dataset:                                           CaseControlGrade100Genes
- Notes:                                                           1 Hour Run
-----------------------------------------------------------------------------
- Settings file:                                                             
-----------------------------------------------------------------------------
- Input directory:                                         data/project/input
- Observations file:                                      CCGrade100Genes.txt
- Observation count:                                                      572
- Number of variables:                                                    101
- Variable names:                                                      inFile
- Discretization policy:                                                 none
- Exceptions to the discretization policy:                               none
-----------------------------------------------------------------------------
- Initial structure file:                                                    
- 'Must be present' edges file:                                              
- 'Must not be present' edges file:                                          
- Min. Markov lag:                                                          0
- Max. Markov lag:                                                          0
- Max. parent count:                                                        5
- Equivalent sample size for Dirichlet parameter prior:                   1.0
-----------------------------------------------------------------------------
- Searcher:                                                    SearcherGreedy
- Proposer:                                           ProposerRandomLocalMove
- Evaluator:                                        defaulted to EvaluatorBDe
- Decider:                                         defaulted to DeciderGreedy
-----------------------------------------------------------------------------
- Pre-compute logGamma:                                                   yes
- Cache:                                                           fastLevel2
- Cycle checking method:                                   Depth-first Search
-----------------------------------------------------------------------------
- Min. proposed networks after high score:                               1000
- Min. proposed networks before restart:                                 3000
- Max. proposed networks before restart:                                 5000
- Restart method:                                          use random network
-   with max. parent count:                                                 3
-----------------------------------------------------------------------------
- Output directory:                                       data/project/output
- Report file:                                                     report.txt
- Number of best networks tracked:                                          1
- Max. time:                                                            1.0 h
- Max. restarts:                                                        10000
- Min. networks before checking:                                         1000
- Screen reporting interval:                                           20.0 s
- File reporting interval:                                             10.0 m
-----------------------------------------------------------------------------
- Compute influence scores:                                               yes
- Compute consensus graph:                                                yes
- Create consensus graph as HTML:                                         yes
- Create 'dot' output:                                                    yes
- Location of 'dot':          C:/Program Files (x86)/Graphviz2.38/bin/dot.exe
-----------------------------------------------------------------------------
- XML output directory:                                   data/project/output
- XML Report file:                                                           
- XML settings to export:                                                    
- XML parser:                             org.apache.xerces.parsers.SAXParser
- Banjo XML format version:                                               1.0
-----------------------------------------------------------------------------
- Seed for starting search:                                     1574477358603
-----------------------------------------------------------------------------
- Number of threads:                                                        1
-----------------------------------------------------------------------------

Memory info before starting the search: Banjo is using 18 mb of memory
Prep. time used: 159.0 ms
Beginning to search: expect a status report every 20.0 s

Status:  Networks 1723000
         Time     20.0 s (0.5% of max. 1.0 h)
         Restarts 344 (3.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 3423000
         Time     40.01 s (1.1% of max. 1.0 h)
         Restarts 684 (6.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 5182000
         Time     1.0 m (1.6% of max. 1.0 h)
         Restarts 1036 (10.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 6963000
         Time     1.33 m (2.2% of max. 1.0 h)
         Restarts 1392 (13.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 8744000
         Time     1.67 m (2.7% of max. 1.0 h)
         Restarts 1748 (17.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 10535000
         Time     2.0 m (3.3% of max. 1.0 h)
         Restarts 2106 (21.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 12327000
         Time     2.33 m (3.8% of max. 1.0 h)
         Restarts 2465 (24.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 14122000
         Time     2.67 m (4.4% of max. 1.0 h)
         Restarts 2824 (28.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 15915000
         Time     3.0 m (5.0% of max. 1.0 h)
         Restarts 3182 (31.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 17712000
         Time     3.33 m (5.5% of max. 1.0 h)
         Restarts 3542 (35.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 19515000
         Time     3.67 m (6.1% of max. 1.0 h)
         Restarts 3902 (39.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 21313000
         Time     4.0 m (6.6% of max. 1.0 h)
         Restarts 4262 (42.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 23113000
         Time     4.33 m (7.2% of max. 1.0 h)
         Restarts 4622 (46.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 24908000
         Time     4.67 m (7.7% of max. 1.0 h)
         Restarts 4981 (49.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 26674000
         Time     5.0 m (8.3% of max. 1.0 h)
         Restarts 5334 (53.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 27544000
         Time     5.33 m (8.8% of max. 1.0 h)
         Restarts 5508 (55.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 29280000
         Time     5.67 m (9.4% of max. 1.0 h)
         Restarts 5855 (58.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 31054000
         Time     6.0 m (10.0% of max. 1.0 h)
         Restarts 6210 (62.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 32829000
         Time     6.33 m (10.5% of max. 1.0 h)
         Restarts 6565 (65.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 34601000
         Time     6.67 m (11.1% of max. 1.0 h)
         Restarts 6919 (69.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 36383000
         Time     7.0 m (11.6% of max. 1.0 h)
         Restarts 7276 (72.7% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 38149000
         Time     7.33 m (12.2% of max. 1.0 h)
         Restarts 7629 (76.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 39933000
         Time     7.67 m (12.7% of max. 1.0 h)
         Restarts 7986 (79.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 41709000
         Time     8.0 m (13.3% of max. 1.0 h)
         Restarts 8341 (83.4% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 43477000
         Time     8.33 m (13.8% of max. 1.0 h)
         Restarts 8695 (86.9% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 45248000
         Time     8.67 m (14.4% of max. 1.0 h)
         Restarts 9049 (90.4% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 46990000
         Time     9.0 m (15.0% of max. 1.0 h)
         Restarts 9397 (93.9% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 48770000
         Time     9.33 m (15.5% of max. 1.0 h)
         Restarts 9753 (97.5% of max. 10000)
         Banjo is using 23 mb of memory



-----------------------------------------------------------------------------
- Final report                                           Best network overall
-----------------------------------------------------------------------------


Network score: -12540.9791, first found at iteration 2660993
101
  0 3 22 45 98
  1 2 80 87
  2 2 47 79
  3 2 9 45
  4 2 54 81
  5 2 18 65
  6 3 2 40 81
  7 2 52 68
  8 3 19 27 54
  9 1 19
 10 2 38 94
 11 1 13
 12 2 46 87
 13 2 8 33
 14 3 22 56 68
 15 2 47 56
 16 2 28 74
 17 2 40 49
 18 2 43 45
 19 1 41
 20 2 3 45
 21 2 25 54
 22 2 6 46
 23 2 55 68
 24 1 94
 25 2 40 72
 26 2 21 92
 27 2 46 86
 28 3 22 36 49
 29 3 0 40 87
 30 2 33 98
 31 2 27 81
 32 2 15 48
 33 3 19 37 94
 34 2 43 84
 35 2 37 89
 36 2 6 50
 37 2 21 28
 38 2 22 61
 39 3 11 45 95
 40 1 19
 41 0
 42 3 37 41 76
 43 3 21 28 81
 44 3 41 52 87
 45 2 9 87
 46 2 6 19
 47 1 19
 48 3 47 69 94
 49 2 27 81
 50 2 44 95
 51 2 27 89
 52 2 4 40
 53 3 38 39 49
 54 2 3 79
 55 3 32 38 53
 56 2 47 95
 57 3 5 75 89
 58 2 0 11
 59 2 57 64
 60 2 47 93
 61 1 89
 62 2 55 90
 63 2 93 95
 64 2 14 71
 65 3 4 14 83
 66 3 26 68 81
 67 2 20 94
 68 2 3 81
 69 2 8 67
 70 2 20 98
 71 2 20 88
 72 2 15 74
 73 2 87 98
 74 1 49
 75 2 18 86
 76 1 88
 77 1 49
 78 2 7 15
 79 2 20 81
 80 2 59 95
 81 2 86 98
 82 2 52 95
 83 1 49
 84 3 45 71 92
 85 2 31 39
 86 2 87 98
 87 2 9 19
 88 3 15 49 54
 89 3 9 49 95
 90 2 19 95
 91 3 29 39 90
 92 2 14 95
 93 2 13 87
 94 2 18 59
 95 2 79 86
 96 3 39 88 89
 97 2 4 50
 98 2 20 47
 99 2 57 80
100 2 0 86


-----------------------------------------------------------------------------
- Search Statistics                                                          
-----------------------------------------------------------------------------

Statistics collected in searcher 'SearcherGreedy':
  Number of networks examined: 50001000
  Total time used: 9.56 m
  High score: -12540.9791, first found at iteration 2660993
  Number of restarts: 10000

Statistics collected in proposer 'ProposerRandomLocalMove':
  Additions -- proposed:    16662119
  Deletions -- proposed:    16677759
  Reversals -- proposed:    16661121

Statistics collected in cycle checker 'CycleCheckerCheckThenApply':
  Additions -- considered:  16662119,  acyclic:  11504574
  Deletions -- no cyclicity test necessary
  Reversals -- considered:  16661121,  acyclic:  11262386

Statistics collected in evaluator 'EvaluatorBDe':
  Scores computed:          16324723
  Scores (cache)            placed         fetched        
      with 0 parents:       101            3231600        
      with 1 parents:       10100          17321367       
      with 2 parents:       492763         11220257       
      with 3 parents:       11713266       3180871        
      with 4 parents:       3781347        873034         
      with 5 parents:       327146         68318          

Statistics collected in decider 'DeciderGreedy':
  Additions -- considered:  11504574,  better score:  1739442
  Deletions -- considered:  16677759,  better score:  1391558
  Reversals -- considered:  11262386,  better score:  764468

Memory info after completing the search: Banjo is using 23 mb of memory


Network score: -12540.9791, found by thread 1
101
  0 3 22 45 98
  1 2 80 87
  2 2 47 79
  3 2 9 45
  4 2 54 81
  5 2 18 65
  6 3 2 40 81
  7 2 52 68
  8 3 19 27 54
  9 1 19
 10 2 38 94
 11 1 13
 12 2 46 87
 13 2 8 33
 14 3 22 56 68
 15 2 47 56
 16 2 28 74
 17 2 40 49
 18 2 43 45
 19 1 41
 20 2 3 45
 21 2 25 54
 22 2 6 46
 23 2 55 68
 24 1 94
 25 2 40 72
 26 2 21 92
 27 2 46 86
 28 3 22 36 49
 29 3 0 40 87
 30 2 33 98
 31 2 27 81
 32 2 15 48
 33 3 19 37 94
 34 2 43 84
 35 2 37 89
 36 2 6 50
 37 2 21 28
 38 2 22 61
 39 3 11 45 95
 40 1 19
 41 0
 42 3 37 41 76
 43 3 21 28 81
 44 3 41 52 87
 45 2 9 87
 46 2 6 19
 47 1 19
 48 3 47 69 94
 49 2 27 81
 50 2 44 95
 51 2 27 89
 52 2 4 40
 53 3 38 39 49
 54 2 3 79
 55 3 32 38 53
 56 2 47 95
 57 3 5 75 89
 58 2 0 11
 59 2 57 64
 60 2 47 93
 61 1 89
 62 2 55 90
 63 2 93 95
 64 2 14 71
 65 3 4 14 83
 66 3 26 68 81
 67 2 20 94
 68 2 3 81
 69 2 8 67
 70 2 20 98
 71 2 20 88
 72 2 15 74
 73 2 87 98
 74 1 49
 75 2 18 86
 76 1 88
 77 1 49
 78 2 7 15
 79 2 20 81
 80 2 59 95
 81 2 86 98
 82 2 52 95
 83 1 49
 84 3 45 71 92
 85 2 31 39
 86 2 87 98
 87 2 9 19
 88 3 15 49 54
 89 3 9 49 95
 90 2 19 95
 91 3 29 39 90
 92 2 14 95
 93 2 13 87
 94 2 18 59
 95 2 79 86
 96 3 39 88 89
 97 2 4 50
 98 2 20 47
 99 2 57 80
100 2 0 86

-----------------------------------------------------------------------------
- Post-processing                                            Influence scores
-----------------------------------------------------------------------------

Influence score for  (98,0) ->   (0,0)   -.1163
Influence score for  (45,0) ->   (0,0)   .0888
Influence score for  (22,0) ->   (0,0)   .1444
Influence score for  (87,0) ->   (1,0)   -.3144
Influence score for  (80,0) ->   (1,0)   -.3144
Influence score for  (79,0) ->   (2,0)   -.3208
Influence score for  (47,0) ->   (2,0)   .0000
Influence score for  (45,0) ->   (3,0)   .3309
Influence score for   (9,0) ->   (3,0)   .3143
Influence score for  (81,0) ->   (4,0)   .0000
Influence score for  (54,0) ->   (4,0)   .0000
Influence score for  (65,0) ->   (5,0)   -.3178
Influence score for  (18,0) ->   (5,0)   .3178
Influence score for  (81,0) ->   (6,0)   -.1104
Influence score for  (40,0) ->   (6,0)   .0277
Influence score for   (2,0) ->   (6,0)   .1103
Influence score for  (68,0) ->   (7,0)   -.0597
Influence score for  (52,0) ->   (7,0)   -.4913
Influence score for  (54,0) ->   (8,0)   -.0507
Influence score for  (27,0) ->   (8,0)   .0000
Influence score for  (19,0) ->   (8,0)   .0997
Influence score for  (19,0) ->   (9,0)   .0000
Influence score for  (94,0) ->  (10,0)   -.2406
Influence score for  (38,0) ->  (10,0)   .0000
Influence score for  (13,0) ->  (11,0)   .0000
Influence score for  (87,0) ->  (12,0)   -.3210
Influence score for  (46,0) ->  (12,0)   .3210
Influence score for  (33,0) ->  (13,0)   .3331
Influence score for   (8,0) ->  (13,0)   .2758
Influence score for  (68,0) ->  (14,0)   -.0555
Influence score for  (56,0) ->  (14,0)   -.2217
Influence score for  (22,0) ->  (14,0)   .2219
Influence score for  (56,0) ->  (15,0)   -.3331
Influence score for  (47,0) ->  (15,0)   .4180
Influence score for  (74,0) ->  (16,0)   -.3718
Influence score for  (28,0) ->  (16,0)   .0376
Influence score for  (49,0) ->  (17,0)   .1621
Influence score for  (40,0) ->  (17,0)   .3288
Influence score for  (45,0) ->  (18,0)   .1599
Influence score for  (43,0) ->  (18,0)   .0000
Influence score for  (41,0) ->  (19,0)   .0000
Influence score for  (45,0) ->  (20,0)   .0000
Influence score for   (3,0) ->  (20,0)   .0000
Influence score for  (54,0) ->  (21,0)   -.1601
Influence score for  (25,0) ->  (21,0)   .3268
Influence score for  (46,0) ->  (22,0)   .1098
Influence score for   (6,0) ->  (22,0)   .3246
Influence score for  (68,0) ->  (23,0)   .0000
Influence score for  (55,0) ->  (23,0)   -.3331
Influence score for  (94,0) ->  (24,0)   .0000
Influence score for  (72,0) ->  (25,0)   -.3308
Influence score for  (40,0) ->  (25,0)   .1641
Influence score for  (92,0) ->  (26,0)   -.3220
Influence score for  (21,0) ->  (26,0)   .1553
Influence score for  (86,0) ->  (27,0)   -.3331
Influence score for  (46,0) ->  (27,0)   .0000
Influence score for  (49,0) ->  (28,0)   .1081
Influence score for  (36,0) ->  (28,0)   .1371
Influence score for  (22,0) ->  (28,0)   .3095
Influence score for  (87,0) ->  (29,0)   .0000
Influence score for  (40,0) ->  (29,0)   .0664
Influence score for   (0,0) ->  (29,0)   .0000
Influence score for  (98,0) ->  (30,0)   -.3248
Influence score for  (33,0) ->  (30,0)   .3248
Influence score for  (81,0) ->  (31,0)   -.3269
Influence score for  (27,0) ->  (31,0)   .0000
Influence score for  (48,0) ->  (32,0)   -.1308
Influence score for  (15,0) ->  (32,0)   .1373
Influence score for  (94,0) ->  (33,0)   -.3301
Influence score for  (37,0) ->  (33,0)   .1111
Influence score for  (19,0) ->  (33,0)   .1844
Influence score for  (84,0) ->  (34,0)   -.0598
Influence score for  (43,0) ->  (34,0)   .4026
Influence score for  (89,0) ->  (35,0)   .0000
Influence score for  (37,0) ->  (35,0)   .1044
Influence score for  (50,0) ->  (36,0)   .3311
Influence score for   (6,0) ->  (36,0)   .3311
Influence score for  (28,0) ->  (37,0)   -.1807
Influence score for  (21,0) ->  (37,0)   .4757
Influence score for  (61,0) ->  (38,0)   -.3331
Influence score for  (22,0) ->  (38,0)   .4369
Influence score for  (95,0) ->  (39,0)   .1872
Influence score for  (45,0) ->  (39,0)   .0000
Influence score for  (11,0) ->  (39,0)   .1622
Influence score for  (19,0) ->  (40,0)   .0000
Influence score for  (76,0) ->  (42,0)   -.1581
Influence score for  (41,0) ->  (42,0)   .0000
Influence score for  (37,0) ->  (42,0)   .1030
Influence score for  (81,0) ->  (43,0)   .0000
Influence score for  (28,0) ->  (43,0)   .0269
Influence score for  (21,0) ->  (43,0)   .3200
Influence score for  (87,0) ->  (44,0)   -.1111
Influence score for  (52,0) ->  (44,0)   -.2218
Influence score for  (41,0) ->  (44,0)   .1111
Influence score for  (87,0) ->  (45,0)   -.3331
Influence score for   (9,0) ->  (45,0)   .3331
Influence score for  (19,0) ->  (46,0)   .3077
Influence score for   (6,0) ->  (46,0)   .3077
Influence score for  (19,0) ->  (47,0)   .0000
Influence score for  (94,0) ->  (48,0)   .0082
Influence score for  (69,0) ->  (48,0)   -.0520
Influence score for  (47,0) ->  (48,0)   .0000
Influence score for  (81,0) ->  (49,0)   -.3331
Influence score for  (27,0) ->  (49,0)   .0000
Influence score for  (95,0) ->  (50,0)   .1346
Influence score for  (44,0) ->  (50,0)   .4995
Influence score for  (89,0) ->  (51,0)   .1794
Influence score for  (27,0) ->  (51,0)   .0000
Influence score for  (40,0) ->  (52,0)   .0000
Influence score for   (4,0) ->  (52,0)   .0000
Influence score for  (49,0) ->  (53,0)   -.1101
Influence score for  (39,0) ->  (53,0)   .0000
Influence score for  (38,0) ->  (53,0)   .0000
Influence score for  (79,0) ->  (54,0)   .0000
Influence score for   (3,0) ->  (54,0)   -.1251
Influence score for  (53,0) ->  (55,0)   .0555
Influence score for  (38,0) ->  (55,0)   .0556
Influence score for  (32,0) ->  (55,0)   .0556
Influence score for  (95,0) ->  (56,0)   .1047
Influence score for  (47,0) ->  (56,0)   .0000
Influence score for  (89,0) ->  (57,0)   .0000
Influence score for  (75,0) ->  (57,0)   .0000
Influence score for   (5,0) ->  (57,0)   .0000
Influence score for  (11,0) ->  (58,0)   .0000
Influence score for   (0,0) ->  (58,0)   .0000
Influence score for  (64,0) ->  (59,0)   .0000
Influence score for  (57,0) ->  (59,0)   .0000
Influence score for  (93,0) ->  (60,0)   .0000
Influence score for  (47,0) ->  (60,0)   .0000
Influence score for  (89,0) ->  (61,0)   .0000
Influence score for  (90,0) ->  (62,0)   -.2072
Influence score for  (55,0) ->  (62,0)   .1778
Influence score for  (95,0) ->  (63,0)   .3053
Influence score for  (93,0) ->  (63,0)   .0000
Influence score for  (71,0) ->  (64,0)   .0000
Influence score for  (14,0) ->  (64,0)   .0000
Influence score for  (83,0) ->  (65,0)   .0000
Influence score for  (14,0) ->  (65,0)   .0000
Influence score for   (4,0) ->  (65,0)   .0000
Influence score for  (81,0) ->  (66,0)   .0000
Influence score for  (68,0) ->  (66,0)   .1101
Influence score for  (26,0) ->  (66,0)   .0000
Influence score for  (94,0) ->  (67,0)   .0000
Influence score for  (20,0) ->  (67,0)   .0000
Influence score for  (81,0) ->  (68,0)   .0000
Influence score for   (3,0) ->  (68,0)   .0000
Influence score for  (67,0) ->  (69,0)   .1664
Influence score for   (8,0) ->  (69,0)   -.1379
Influence score for  (98,0) ->  (70,0)   .2743
Influence score for  (20,0) ->  (70,0)   .3167
Influence score for  (88,0) ->  (71,0)   .1484
Influence score for  (20,0) ->  (71,0)   .0000
Influence score for  (74,0) ->  (72,0)   .1558
Influence score for  (15,0) ->  (72,0)   .0000
Influence score for  (98,0) ->  (73,0)   .0000
Influence score for  (87,0) ->  (73,0)   .0000
Influence score for  (49,0) ->  (74,0)   -.4874
Influence score for  (86,0) ->  (75,0)   -.1667
Influence score for  (18,0) ->  (75,0)   -.1621
Influence score for  (88,0) ->  (76,0)   .5161
Influence score for  (49,0) ->  (77,0)   -.4768
Influence score for  (15,0) ->  (78,0)   -.0302
Influence score for   (7,0) ->  (78,0)   .0000
Influence score for  (81,0) ->  (79,0)   .0000
Influence score for  (20,0) ->  (79,0)   .1667
Influence score for  (95,0) ->  (80,0)   .1398
Influence score for  (59,0) ->  (80,0)   .0000
Influence score for  (98,0) ->  (81,0)   .0000
Influence score for  (86,0) ->  (81,0)   .0000
Influence score for  (95,0) ->  (82,0)   .3528
Influence score for  (52,0) ->  (82,0)   .0000
Influence score for  (49,0) ->  (83,0)   .0000
Influence score for  (92,0) ->  (84,0)   .0000
Influence score for  (71,0) ->  (84,0)   -.1115
Influence score for  (45,0) ->  (84,0)   .1091
Influence score for  (39,0) ->  (85,0)   -.1689
Influence score for  (31,0) ->  (85,0)   -.2464
Influence score for  (98,0) ->  (86,0)   .0000
Influence score for  (87,0) ->  (86,0)   .0000
Influence score for  (19,0) ->  (87,0)   .0000
Influence score for   (9,0) ->  (87,0)   -.0127
Influence score for  (54,0) ->  (88,0)   .1091
Influence score for  (49,0) ->  (88,0)   .0000
Influence score for  (15,0) ->  (88,0)   .0581
Influence score for  (95,0) ->  (89,0)   .2144
Influence score for  (49,0) ->  (89,0)   .0000
Influence score for   (9,0) ->  (89,0)   .0000
Influence score for  (95,0) ->  (90,0)   .3330
Influence score for  (19,0) ->  (90,0)   .0000
Influence score for  (90,0) ->  (91,0)   .0000
Influence score for  (39,0) ->  (91,0)   .0000
Influence score for  (29,0) ->  (91,0)   .0000
Influence score for  (95,0) ->  (92,0)   .2221
Influence score for  (14,0) ->  (92,0)   .0000
Influence score for  (87,0) ->  (93,0)   .0000
Influence score for  (13,0) ->  (93,0)   -.1667
Influence score for  (59,0) ->  (94,0)   .0000
Influence score for  (18,0) ->  (94,0)   .0000
Influence score for  (86,0) ->  (95,0)   .0000
Influence score for  (79,0) ->  (95,0)   .3164
Influence score for  (89,0) ->  (96,0)   .1091
Influence score for  (88,0) ->  (96,0)   .2568
Influence score for  (39,0) ->  (96,0)   .0556
Influence score for  (50,0) ->  (97,0)   .0000
Influence score for   (4,0) ->  (97,0)   -.1372
Influence score for  (47,0) ->  (98,0)   .0000
Influence score for  (20,0) ->  (98,0)   -.1664
Influence score for  (80,0) ->  (99,0)   .0000
Influence score for  (57,0) ->  (99,0)   .0000
Influence score for  (86,0) ->   (100,0)   .0000
Influence score for   (0,0) ->   (100,0)   .0000

-----------------------------------------------------------------------------
- Post-processing                                  DOT graphics format output
-----------------------------------------------------------------------------

digraph abstract { 

label = "Banjo Version 2.2.0\nHigh scoring network, score: -12540.9791\nProject: Fall 2019\nUser: Bernardo Jordan\nDataset: CaseControlGrade100Genes"; 
labeljust="l"; 

    0 [label="DiseaseGrade"];
    1 [label="RAVER2"];
    2 [label="YAF2"];
    3 [label="TRPC3"];
    4 [label="ZNF7"];
    5 [label="PARD6B"];
    6 [label="CYP4F8"];
    7 [label="ABCD2"];
    8 [label="NIPSNAP3B"];
    9 [label="CA8"];
    10 [label="EFHC2"];
    11 [label="CXCL5"];
    12 [label="MATN3"];
    13 [label="TLL1"];
    14 [label="MYO1D"];
    15 [label="GALR2"];
    16 [label="SIDT1"];
    17 [label="SIM1"];
    18 [label="PLCH1"];
    19 [label="MSX2"];
    20 [label="ZNF442"];
    21 [label="GREM2"];
    22 [label="CDH9"];
    23 [label="ADRA1B"];
    24 [label="EGF"];
    25 [label="MMP10"];
    26 [label="ZNF165"];
    27 [label="ZNF257"];
    28 [label="DRD1"];
    29 [label="TSPAN2"];
    30 [label="FCER1A"];
    31 [label="VGLL3"];
    32 [label="TRPC6"];
    33 [label="IL7"];
    34 [label="CNTN6"];
    35 [label="PLA2G1B"];
    36 [label="PTGER2"];
    37 [label="LGALS13"];
    38 [label="SH3TC2"];
    39 [label="ASCL2"];
    40 [label="CORIN"];
    41 [label="DPYS"];
    42 [label="PRDM13"];
    43 [label="HOOK1"];
    44 [label="ADAMTS20"];
    45 [label="BRCA2"];
    46 [label="CCDC69"];
    47 [label="INHBE"];
    48 [label="NFE2L3"];
    49 [label="CYP2B6"];
    50 [label="XYLB"];
    51 [label="MRC2"];
    52 [label="SEMA4C"];
    53 [label="SMYD3"];
    54 [label="RAB3IL1"];
    55 [label="MRPS14"];
    56 [label="PAF1"];
    57 [label="KIF13B"];
    58 [label="SLC25A12"];
    59 [label="ADIPOR2"];
    60 [label="DGKD"];
    61 [label="NUPL2"];
    62 [label="ACTR1A"];
    63 [label="PITPNA"];
    64 [label="SNF8"];
    65 [label="SECISBP2"];
    66 [label="TARBP1"];
    67 [label="ARHGEF17"];
    68 [label="KIF3B"];
    69 [label="TSPYL2"];
    70 [label="VAPB"];
    71 [label="TAF2"];
    72 [label="GOLGB1"];
    73 [label="SLC25A1"];
    74 [label="TBC1D5"];
    75 [label="PMF1"];
    76 [label="LHFPL2"];
    77 [label="ELP3"];
    78 [label="RHOG"];
    79 [label="CCDC25"];
    80 [label="CLK2"];
    81 [label="FAM57A"];
    82 [label="CYP27A1"];
    83 [label="METAP1"];
    84 [label="TEX261"];
    85 [label="DPAGT1"];
    86 [label="STX18"];
    87 [label="PLCD1"];
    88 [label="TMEM109"];
    89 [label="TTC1"];
    90 [label="OXA1L"];
    91 [label="ST5"];
    92 [label="TRIM26"];
    93 [label="YIPF1"];
    94 [label="GAB2"];
    95 [label="NPLOC4"];
    96 [label="VPS33B"];
    97 [label="FBXW4"];
    98 [label="MPPE1"];
    99 [label="DUSP14"];
    100 [label="FMO4"];

    22->0;
    45->0;
    98->0;
    80->1;
    87->1;
    47->2;
    79->2;
    9->3;
    45->3;
    54->4;
    81->4;
    18->5;
    65->5;
    2->6;
    40->6;
    81->6;
    52->7;
    68->7;
    19->8;
    27->8;
    54->8;
    19->9;
    38->10;
    94->10;
    13->11;
    46->12;
    87->12;
    8->13;
    33->13;
    22->14;
    56->14;
    68->14;
    47->15;
    56->15;
    28->16;
    74->16;
    40->17;
    49->17;
    43->18;
    45->18;
    41->19;
    3->20;
    45->20;
    25->21;
    54->21;
    6->22;
    46->22;
    55->23;
    68->23;
    94->24;
    40->25;
    72->25;
    21->26;
    92->26;
    46->27;
    86->27;
    22->28;
    36->28;
    49->28;
    0->29;
    40->29;
    87->29;
    33->30;
    98->30;
    27->31;
    81->31;
    15->32;
    48->32;
    19->33;
    37->33;
    94->33;
    43->34;
    84->34;
    37->35;
    89->35;
    6->36;
    50->36;
    21->37;
    28->37;
    22->38;
    61->38;
    11->39;
    45->39;
    95->39;
    19->40;
    37->42;
    41->42;
    76->42;
    21->43;
    28->43;
    81->43;
    41->44;
    52->44;
    87->44;
    9->45;
    87->45;
    6->46;
    19->46;
    19->47;
    47->48;
    69->48;
    94->48;
    27->49;
    81->49;
    44->50;
    95->50;
    27->51;
    89->51;
    4->52;
    40->52;
    38->53;
    39->53;
    49->53;
    3->54;
    79->54;
    32->55;
    38->55;
    53->55;
    47->56;
    95->56;
    5->57;
    75->57;
    89->57;
    0->58;
    11->58;
    57->59;
    64->59;
    47->60;
    93->60;
    89->61;
    55->62;
    90->62;
    93->63;
    95->63;
    14->64;
    71->64;
    4->65;
    14->65;
    83->65;
    26->66;
    68->66;
    81->66;
    20->67;
    94->67;
    3->68;
    81->68;
    8->69;
    67->69;
    20->70;
    98->70;
    20->71;
    88->71;
    15->72;
    74->72;
    87->73;
    98->73;
    49->74;
    18->75;
    86->75;
    88->76;
    49->77;
    7->78;
    15->78;
    20->79;
    81->79;
    59->80;
    95->80;
    86->81;
    98->81;
    52->82;
    95->82;
    49->83;
    45->84;
    71->84;
    92->84;
    31->85;
    39->85;
    87->86;
    98->86;
    9->87;
    19->87;
    15->88;
    49->88;
    54->88;
    9->89;
    49->89;
    95->89;
    19->90;
    95->90;
    29->91;
    39->91;
    90->91;
    14->92;
    95->92;
    13->93;
    87->93;
    18->94;
    59->94;
    79->95;
    86->95;
    39->96;
    88->96;
    89->96;
    4->97;
    50->97;
    20->98;
    47->98;
    57->99;
    80->99;
    0->100;
    86->100;
}

-----------------------------------------------------------------------------
- Banjo                        Bayesian Network Inference with Java Objects -
- Release 2.2.0                                                 15 Apr 2008 -
- Licensed from Duke University                                             -
- Copyright (c) 2005-08 by Alexander J. Hartemink                           -
- All rights reserved                                                       -
-----------------------------------------------------------------------------
- Project:                                                          Fall 2019
- User:                                                       Bernardo Jordan
- Dataset:                                           CaseControlGrade100Genes
- Notes:                                                           2 Hour Run
-----------------------------------------------------------------------------
- Settings file:                                                             
-----------------------------------------------------------------------------
- Input directory:                                         data/project/input
- Observations file:                                      CCGrade100Genes.txt
- Observation count:                                                      572
- Number of variables:                                                    101
- Variable names:                                                      inFile
- Discretization policy:                                                 none
- Exceptions to the discretization policy:                               none
-----------------------------------------------------------------------------
- Initial structure file:                                                    
- 'Must be present' edges file:                                              
- 'Must not be present' edges file:                                          
- Min. Markov lag:                                                          0
- Max. Markov lag:                                                          0
- Max. parent count:                                                        5
- Equivalent sample size for Dirichlet parameter prior:                   1.0
-----------------------------------------------------------------------------
- Searcher:                                                    SearcherGreedy
- Proposer:                                           ProposerRandomLocalMove
- Evaluator:                                        defaulted to EvaluatorBDe
- Decider:                                         defaulted to DeciderGreedy
-----------------------------------------------------------------------------
- Pre-compute logGamma:                                                   yes
- Cache:                                                           fastLevel2
- Cycle checking method:                                   Depth-first Search
-----------------------------------------------------------------------------
- Min. proposed networks after high score:                               1000
- Min. proposed networks before restart:                                 3000
- Max. proposed networks before restart:                                 5000
- Restart method:                                          use random network
-   with max. parent count:                                                 3
-----------------------------------------------------------------------------
- Output directory:                                       data/project/output
- Report file:                                                     report.txt
- Number of best networks tracked:                                          1
- Max. time:                                                            2.0 h
- Max. restarts:                                                        10000
- Min. networks before checking:                                         1000
- Screen reporting interval:                                           20.0 s
- File reporting interval:                                             10.0 m
-----------------------------------------------------------------------------
- Compute influence scores:                                               yes
- Compute consensus graph:                                                yes
- Create consensus graph as HTML:                                         yes
- Create 'dot' output:                                                    yes
- Location of 'dot':          C:/Program Files (x86)/Graphviz2.38/bin/dot.exe
-----------------------------------------------------------------------------
- XML output directory:                                   data/project/output
- XML Report file:                                                           
- XML settings to export:                                                    
- XML parser:                             org.apache.xerces.parsers.SAXParser
- Banjo XML format version:                                               1.0
-----------------------------------------------------------------------------
- Seed for starting search:                                     1574482757088
-----------------------------------------------------------------------------
- Number of threads:                                                        1
-----------------------------------------------------------------------------

Memory info before starting the search: Banjo is using 18 mb of memory
Prep. time used: 161.0 ms
Beginning to search: expect a status report every 20.0 s

Status:  Networks 1693000
         Time     20.01 s (0.2% of max. 2.0 h)
         Restarts 338 (3.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 3429000
         Time     40.01 s (0.5% of max. 2.0 h)
         Restarts 685 (6.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 5178000
         Time     1.0 m (0.8% of max. 2.0 h)
         Restarts 1035 (10.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 6936000
         Time     1.33 m (1.1% of max. 2.0 h)
         Restarts 1386 (13.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 8696000
         Time     1.67 m (1.3% of max. 2.0 h)
         Restarts 1738 (17.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 10458000
         Time     2.0 m (1.6% of max. 2.0 h)
         Restarts 2091 (20.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 12226000
         Time     2.33 m (1.9% of max. 2.0 h)
         Restarts 2444 (24.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 13996000
         Time     2.67 m (2.2% of max. 2.0 h)
         Restarts 2798 (27.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 15770000
         Time     3.0 m (2.5% of max. 2.0 h)
         Restarts 3153 (31.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 17499000
         Time     3.33 m (2.7% of max. 2.0 h)
         Restarts 3499 (34.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 19209000
         Time     3.67 m (3.0% of max. 2.0 h)
         Restarts 3841 (38.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 20964000
         Time     4.0 m (3.3% of max. 2.0 h)
         Restarts 4192 (41.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 22760000
         Time     4.33 m (3.6% of max. 2.0 h)
         Restarts 4551 (45.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 24560000
         Time     4.67 m (3.8% of max. 2.0 h)
         Restarts 4911 (49.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 26362000
         Time     5.0 m (4.1% of max. 2.0 h)
         Restarts 5272 (52.7% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 28157000
         Time     5.33 m (4.4% of max. 2.0 h)
         Restarts 5631 (56.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 29955000
         Time     5.67 m (4.7% of max. 2.0 h)
         Restarts 5990 (59.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 31755000
         Time     6.0 m (5.0% of max. 2.0 h)
         Restarts 6350 (63.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 33556000
         Time     6.33 m (5.2% of max. 2.0 h)
         Restarts 6710 (67.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 35327000
         Time     6.67 m (5.5% of max. 2.0 h)
         Restarts 7065 (70.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 37123000
         Time     7.0 m (5.8% of max. 2.0 h)
         Restarts 7424 (74.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 38920000
         Time     7.33 m (6.1% of max. 2.0 h)
         Restarts 7783 (77.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 40721000
         Time     7.67 m (6.3% of max. 2.0 h)
         Restarts 8143 (81.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 42515000
         Time     8.0 m (6.6% of max. 2.0 h)
         Restarts 8502 (85.0% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 44312000
         Time     8.33 m (6.9% of max. 2.0 h)
         Restarts 8862 (88.6% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 46112000
         Time     8.67 m (7.2% of max. 2.0 h)
         Restarts 9222 (92.2% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 47919000
         Time     9.0 m (7.5% of max. 2.0 h)
         Restarts 9583 (95.8% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 49718000
         Time     9.33 m (7.7% of max. 2.0 h)
         Restarts 9943 (99.4% of max. 10000)
         Banjo is using 23 mb of memory



-----------------------------------------------------------------------------
- Final report                                           Best network overall
-----------------------------------------------------------------------------


Network score: -12587.7009, first found at iteration 27550989
101
  0 3 37 49 88
  1 3 15 48 63
  2 1 88
  3 2 15 98
  4 2 2 94
  5 2 0 44
  6 2 43 51
  7 2 44 74
  8 2 47 74
  9 2 40 94
 10 1 45
 11 3 0 32 51
 12 2 21 89
 13 2 50 55
 14 3 19 27 68
 15 3 17 18 95
 16 2 35 71
 17 2 43 55
 18 2 28 98
 19 3 22 41 63
 20 2 89 95
 21 2 53 60
 22 2 6 43
 23 3 6 22 69
 24 1 98
 25 2 32 44
 26 2 2 91
 27 2 64 96
 28 1 22
 29 3 26 28 95
 30 2 33 50
 31 2 20 21
 32 3 6 31 60
 33 3 11 53 71
 34 3 28 95 98
 35 2 0 92
 36 4 21 28 31 74
 37 2 22 91
 38 2 43 98
 39 2 49 70
 40 2 6 41
 41 2 0 47
 42 2 26 43
 43 2 51 91
 44 2 28 72
 45 2 47 90
 46 2 17 36
 47 2 22 42
 48 3 29 60 79
 49 2 47 98
 50 3 15 18 96
 51 0
 52 2 47 67
 53 2 51 68
 54 2 3 88
 55 2 49 59
 56 2 94 95
 57 2 35 49
 58 2 71 81
 59 2 0 75
 60 2 47 81
 61 2 48 92
 62 1 54
 63 2 49 88
 64 2 37 80
 65 3 28 48 69
 66 1 98
 67 2 20 49
 68 2 51 81
 69 4 37 47 55 86
 70 1 31
 71 2 90 91
 72 2 19 95
 73 2 47 64
 74 1 98
 75 3 20 49 88
 76 2 23 78
 77 2 19 69
 78 2 27 69
 79 2 60 89
 80 2 53 81
 81 1 88
 82 2 67 95
 83 2 55 71
 84 2 39 86
 85 1 54
 86 3 15 67 70
 87 2 67 91
 88 1 51
 89 2 47 71
 90 2 68 80
 91 1 88
 92 2 54 81
 93 2 51 91
 94 2 33 57
 95 2 45 71
 96 1 95
 97 1 80
 98 3 26 89 97
 99 2 6 84
100 2 43 74


-----------------------------------------------------------------------------
- Search Statistics                                                          
-----------------------------------------------------------------------------

Statistics collected in searcher 'SearcherGreedy':
  Number of networks examined: 50001000
  Total time used: 9.39 m
  High score: -12587.7009, first found at iteration 27550989
  Number of restarts: 10000

Statistics collected in proposer 'ProposerRandomLocalMove':
  Additions -- proposed:    16663620
  Deletions -- proposed:    16674446
  Reversals -- proposed:    16662933

Statistics collected in cycle checker 'CycleCheckerCheckThenApply':
  Additions -- considered:  16663620,  acyclic:  11511857
  Deletions -- no cyclicity test necessary
  Reversals -- considered:  16662933,  acyclic:  11265125

Statistics collected in evaluator 'EvaluatorBDe':
  Scores computed:          16338694
  Scores (cache)            placed         fetched        
      with 0 parents:       101            3228278        
      with 1 parents:       10100          17322610       
      with 2 parents:       492866         11218298       
      with 3 parents:       11727314       3181156        
      with 4 parents:       3781170        872692         
      with 5 parents:       327143         67993          

Statistics collected in decider 'DeciderGreedy':
  Additions -- considered:  11511857,  better score:  1737932
  Deletions -- considered:  16674446,  better score:  1390557
  Reversals -- considered:  11265125,  better score:  762735

Memory info after completing the search: Banjo is using 23 mb of memory


Network score: -12587.7009, found by thread 1
101
  0 3 37 49 88
  1 3 15 48 63
  2 1 88
  3 2 15 98
  4 2 2 94
  5 2 0 44
  6 2 43 51
  7 2 44 74
  8 2 47 74
  9 2 40 94
 10 1 45
 11 3 0 32 51
 12 2 21 89
 13 2 50 55
 14 3 19 27 68
 15 3 17 18 95
 16 2 35 71
 17 2 43 55
 18 2 28 98
 19 3 22 41 63
 20 2 89 95
 21 2 53 60
 22 2 6 43
 23 3 6 22 69
 24 1 98
 25 2 32 44
 26 2 2 91
 27 2 64 96
 28 1 22
 29 3 26 28 95
 30 2 33 50
 31 2 20 21
 32 3 6 31 60
 33 3 11 53 71
 34 3 28 95 98
 35 2 0 92
 36 4 21 28 31 74
 37 2 22 91
 38 2 43 98
 39 2 49 70
 40 2 6 41
 41 2 0 47
 42 2 26 43
 43 2 51 91
 44 2 28 72
 45 2 47 90
 46 2 17 36
 47 2 22 42
 48 3 29 60 79
 49 2 47 98
 50 3 15 18 96
 51 0
 52 2 47 67
 53 2 51 68
 54 2 3 88
 55 2 49 59
 56 2 94 95
 57 2 35 49
 58 2 71 81
 59 2 0 75
 60 2 47 81
 61 2 48 92
 62 1 54
 63 2 49 88
 64 2 37 80
 65 3 28 48 69
 66 1 98
 67 2 20 49
 68 2 51 81
 69 4 37 47 55 86
 70 1 31
 71 2 90 91
 72 2 19 95
 73 2 47 64
 74 1 98
 75 3 20 49 88
 76 2 23 78
 77 2 19 69
 78 2 27 69
 79 2 60 89
 80 2 53 81
 81 1 88
 82 2 67 95
 83 2 55 71
 84 2 39 86
 85 1 54
 86 3 15 67 70
 87 2 67 91
 88 1 51
 89 2 47 71
 90 2 68 80
 91 1 88
 92 2 54 81
 93 2 51 91
 94 2 33 57
 95 2 45 71
 96 1 95
 97 1 80
 98 3 26 89 97
 99 2 6 84
100 2 43 74

-----------------------------------------------------------------------------
- Post-processing                                            Influence scores
-----------------------------------------------------------------------------

Influence score for  (88,0) ->   (0,0)   -.0893
Influence score for  (49,0) ->   (0,0)   .0828
Influence score for  (37,0) ->   (0,0)   .0893
Influence score for  (63,0) ->   (1,0)   .0000
Influence score for  (48,0) ->   (1,0)   .1045
Influence score for  (15,0) ->   (1,0)   .0553
Influence score for  (88,0) ->   (2,0)   .0000
Influence score for  (98,0) ->   (3,0)   -.3331
Influence score for  (15,0) ->   (3,0)   .3331
Influence score for  (94,0) ->   (4,0)   -.1550
Influence score for   (2,0) ->   (4,0)   .3217
Influence score for  (44,0) ->   (5,0)   .3790
Influence score for   (0,0) ->   (5,0)   .0000
Influence score for  (51,0) ->   (6,0)   -.3250
Influence score for  (43,0) ->   (6,0)   .3250
Influence score for  (74,0) ->   (7,0)   -.3246
Influence score for  (44,0) ->   (7,0)   .1579
Influence score for  (74,0) ->   (8,0)   -.3182
Influence score for  (47,0) ->   (8,0)   .4009
Influence score for  (94,0) ->   (9,0)   -.3201
Influence score for  (40,0) ->   (9,0)   .0000
Influence score for  (45,0) ->  (10,0)   .0000
Influence score for  (51,0) ->  (11,0)   -.1280
Influence score for  (32,0) ->  (11,0)   .0666
Influence score for   (0,0) ->  (11,0)   .0000
Influence score for  (89,0) ->  (12,0)   -.5268
Influence score for  (21,0) ->  (12,0)   .3201
Influence score for  (55,0) ->  (13,0)   -.1644
Influence score for  (50,0) ->  (13,0)   .3311
Influence score for  (68,0) ->  (14,0)   -.1111
Influence score for  (27,0) ->  (14,0)   .1104
Influence score for  (19,0) ->  (14,0)   .1111
Influence score for  (95,0) ->  (15,0)   .0183
Influence score for  (18,0) ->  (15,0)   .0833
Influence score for  (17,0) ->  (15,0)   .2173
Influence score for  (71,0) ->  (16,0)   -.1268
Influence score for  (35,0) ->  (16,0)   .2832
Influence score for  (55,0) ->  (17,0)   -.1585
Influence score for  (43,0) ->  (17,0)   .3252
Influence score for  (98,0) ->  (18,0)   -.9986
Influence score for  (28,0) ->  (18,0)   -.1410
Influence score for  (63,0) ->  (19,0)   -.1664
Influence score for  (41,0) ->  (19,0)   .1604
Influence score for  (22,0) ->  (19,0)   .2159
Influence score for  (95,0) ->  (20,0)   -.2648
Influence score for  (89,0) ->  (20,0)   -.6483
Influence score for  (60,0) ->  (21,0)   -.3286
Influence score for  (53,0) ->  (21,0)   -.3286
Influence score for  (43,0) ->  (22,0)   .6460
Influence score for   (6,0) ->  (22,0)   .0000
Influence score for  (69,0) ->  (23,0)   -.1111
Influence score for  (22,0) ->  (23,0)   .3293
Influence score for   (6,0) ->  (23,0)   .2217
Influence score for  (98,0) ->  (24,0)   .0000
Influence score for  (44,0) ->  (25,0)   .3252
Influence score for  (32,0) ->  (25,0)   .1585
Influence score for  (91,0) ->  (26,0)   -.3176
Influence score for   (2,0) ->  (26,0)   .4217
Influence score for  (96,0) ->  (27,0)   -.3330
Influence score for  (64,0) ->  (27,0)   -.1664
Influence score for  (22,0) ->  (28,0)   .0000
Influence score for  (95,0) ->  (29,0)   -.0668
Influence score for  (28,0) ->  (29,0)   -.0042
Influence score for  (26,0) ->  (29,0)   .2494
Influence score for  (50,0) ->  (30,0)   .3192
Influence score for  (33,0) ->  (30,0)   .1526
Influence score for  (21,0) ->  (31,0)   .0000
Influence score for  (20,0) ->  (31,0)   .4932
Influence score for  (60,0) ->  (32,0)   -.0549
Influence score for  (31,0) ->  (32,0)   .0000
Influence score for   (6,0) ->  (32,0)   .1075
Influence score for  (71,0) ->  (33,0)   -.2217
Influence score for  (53,0) ->  (33,0)   -.1126
Influence score for  (11,0) ->  (33,0)   .4237
Influence score for  (98,0) ->  (34,0)   .0000
Influence score for  (95,0) ->  (34,0)   -.1167
Influence score for  (28,0) ->  (34,0)   -.3413
Influence score for  (92,0) ->  (35,0)   -.3995
Influence score for   (0,0) ->  (35,0)   .0000
Influence score for  (74,0) ->  (36,0)   -.0830
Influence score for  (31,0) ->  (36,0)   .3332
Influence score for  (28,0) ->  (36,0)   -.0128
Influence score for  (21,0) ->  (36,0)   .2138
Influence score for  (91,0) ->  (37,0)   -.3160
Influence score for  (22,0) ->  (37,0)   .4378
Influence score for  (98,0) ->  (38,0)   -.3309
Influence score for  (43,0) ->  (38,0)   .4374
Influence score for  (70,0) ->  (39,0)   -.3303
Influence score for  (49,0) ->  (39,0)   .3303
Influence score for  (41,0) ->  (40,0)   .3249
Influence score for   (6,0) ->  (40,0)   .3249
Influence score for  (47,0) ->  (41,0)   .3918
Influence score for   (0,0) ->  (41,0)   .0000
Influence score for  (43,0) ->  (42,0)   .2718
Influence score for  (26,0) ->  (42,0)   .3054
Influence score for  (91,0) ->  (43,0)   -.4836
Influence score for  (51,0) ->  (43,0)   -.1536
Influence score for  (72,0) ->  (44,0)   -.4985
Influence score for  (28,0) ->  (44,0)   .1391
Influence score for  (90,0) ->  (45,0)   -.3331
Influence score for  (47,0) ->  (45,0)   .0000
Influence score for  (36,0) ->  (46,0)   .3054
Influence score for  (17,0) ->  (46,0)   .3054
Influence score for  (42,0) ->  (47,0)   .3187
Influence score for  (22,0) ->  (47,0)   .3187
Influence score for  (79,0) ->  (48,0)   -.1687
Influence score for  (60,0) ->  (48,0)   -.2309
Influence score for  (29,0) ->  (48,0)   .1085
Influence score for  (98,0) ->  (49,0)   -.3331
Influence score for  (47,0) ->  (49,0)   .3331
Influence score for  (96,0) ->  (50,0)   -.1111
Influence score for  (18,0) ->  (50,0)   .2221
Influence score for  (15,0) ->  (50,0)   .1110
Influence score for  (67,0) ->  (52,0)   .0000
Influence score for  (47,0) ->  (52,0)   .0000
Influence score for  (68,0) ->  (53,0)   .2287
Influence score for  (51,0) ->  (53,0)   .0000
Influence score for  (88,0) ->  (54,0)   .0000
Influence score for   (3,0) ->  (54,0)   -.1802
Influence score for  (59,0) ->  (55,0)   .0000
Influence score for  (49,0) ->  (55,0)   .0000
Influence score for  (95,0) ->  (56,0)   .3448
Influence score for  (94,0) ->  (56,0)   .0000
Influence score for  (49,0) ->  (57,0)   .0000
Influence score for  (35,0) ->  (57,0)   .0000
Influence score for  (81,0) ->  (58,0)   .0000
Influence score for  (71,0) ->  (58,0)   .0000
Influence score for  (75,0) ->  (59,0)   .0000
Influence score for   (0,0) ->  (59,0)   .0000
Influence score for  (81,0) ->  (60,0)   .0000
Influence score for  (47,0) ->  (60,0)   .0000
Influence score for  (92,0) ->  (61,0)   -.1667
Influence score for  (48,0) ->  (61,0)   .0000
Influence score for  (54,0) ->  (62,0)   .5726
Influence score for  (88,0) ->  (63,0)   .0000
Influence score for  (49,0) ->  (63,0)   .0000
Influence score for  (80,0) ->  (64,0)   .0000
Influence score for  (37,0) ->  (64,0)   .0000
Influence score for  (69,0) ->  (65,0)   .0000
Influence score for  (48,0) ->  (65,0)   .0000
Influence score for  (28,0) ->  (65,0)   -.2130
Influence score for  (98,0) ->  (66,0)   .0000
Influence score for  (49,0) ->  (67,0)   .0000
Influence score for  (20,0) ->  (67,0)   .0000
Influence score for  (81,0) ->  (68,0)   .0000
Influence score for  (51,0) ->  (68,0)   .0000
Influence score for  (86,0) ->  (69,0)   .0000
Influence score for  (55,0) ->  (69,0)   .0108
Influence score for  (47,0) ->  (69,0)   .0000
Influence score for  (37,0) ->  (69,0)   .0119
Influence score for  (31,0) ->  (70,0)   .0000
Influence score for  (91,0) ->  (71,0)   .0000
Influence score for  (90,0) ->  (71,0)   .0000
Influence score for  (95,0) ->  (72,0)   .3260
Influence score for  (19,0) ->  (72,0)   .0000
Influence score for  (64,0) ->  (73,0)   .0892
Influence score for  (47,0) ->  (73,0)   -.0151
Influence score for  (98,0) ->  (74,0)   .0000
Influence score for  (88,0) ->  (75,0)   .0000
Influence score for  (49,0) ->  (75,0)   .0000
Influence score for  (20,0) ->  (75,0)   .0000
Influence score for  (78,0) ->  (76,0)   .1622
Influence score for  (23,0) ->  (76,0)   .0000
Influence score for  (69,0) ->  (77,0)   .0000
Influence score for  (19,0) ->  (77,0)   .0000
Influence score for  (69,0) ->  (78,0)   .0000
Influence score for  (27,0) ->  (78,0)   .0000
Influence score for  (89,0) ->  (79,0)   .3164
Influence score for  (60,0) ->  (79,0)   -.3167
Influence score for  (81,0) ->  (80,0)   .0000
Influence score for  (53,0) ->  (80,0)   .0000
Influence score for  (88,0) ->  (81,0)   .5223
Influence score for  (95,0) ->  (82,0)   .2120
Influence score for  (67,0) ->  (82,0)   .0000
Influence score for  (71,0) ->  (83,0)   .0000
Influence score for  (55,0) ->  (83,0)   .0358
Influence score for  (86,0) ->  (84,0)   .0000
Influence score for  (39,0) ->  (84,0)   -.4061
Influence score for  (54,0) ->  (85,0)   .0000
Influence score for  (70,0) ->  (86,0)   .0000
Influence score for  (67,0) ->  (86,0)   .0556
Influence score for  (15,0) ->  (86,0)   .0556
Influence score for  (91,0) ->  (87,0)   .0000
Influence score for  (67,0) ->  (87,0)   .0000
Influence score for  (51,0) ->  (88,0)   .0000
Influence score for  (71,0) ->  (89,0)   .0000
Influence score for  (47,0) ->  (89,0)   .0184
Influence score for  (80,0) ->  (90,0)   .1667
Influence score for  (68,0) ->  (90,0)   .1667
Influence score for  (88,0) ->  (91,0)   .5099
Influence score for  (81,0) ->  (92,0)   -.1667
Influence score for  (54,0) ->  (92,0)   -.1667
Influence score for  (91,0) ->  (93,0)   .0000
Influence score for  (51,0) ->  (93,0)   .0000
Influence score for  (57,0) ->  (94,0)   .1641
Influence score for  (33,0) ->  (94,0)   .0000
Influence score for  (71,0) ->  (95,0)   .0000
Influence score for  (45,0) ->  (95,0)   .0000
Influence score for  (95,0) ->  (96,0)   .4114
Influence score for  (80,0) ->  (97,0)   .0000
Influence score for  (97,0) ->  (98,0)   .0000
Influence score for  (89,0) ->  (98,0)   .0000
Influence score for  (26,0) ->  (98,0)   .0000
Influence score for  (84,0) ->  (99,0)   .2862
Influence score for   (6,0) ->  (99,0)   .0000
Influence score for  (74,0) ->   (100,0)   .0000
Influence score for  (43,0) ->   (100,0)   .0000

-----------------------------------------------------------------------------
- Post-processing                                  DOT graphics format output
-----------------------------------------------------------------------------

digraph abstract { 

label = "Banjo Version 2.2.0\nHigh scoring network, score: -12587.7009\nProject: Fall 2019\nUser: Bernardo Jordan\nDataset: CaseControlGrade100Genes"; 
labeljust="l"; 

    0 [label="DiseaseGrade"];
    1 [label="RAVER2"];
    2 [label="YAF2"];
    3 [label="TRPC3"];
    4 [label="ZNF7"];
    5 [label="PARD6B"];
    6 [label="CYP4F8"];
    7 [label="ABCD2"];
    8 [label="NIPSNAP3B"];
    9 [label="CA8"];
    10 [label="EFHC2"];
    11 [label="CXCL5"];
    12 [label="MATN3"];
    13 [label="TLL1"];
    14 [label="MYO1D"];
    15 [label="GALR2"];
    16 [label="SIDT1"];
    17 [label="SIM1"];
    18 [label="PLCH1"];
    19 [label="MSX2"];
    20 [label="ZNF442"];
    21 [label="GREM2"];
    22 [label="CDH9"];
    23 [label="ADRA1B"];
    24 [label="EGF"];
    25 [label="MMP10"];
    26 [label="ZNF165"];
    27 [label="ZNF257"];
    28 [label="DRD1"];
    29 [label="TSPAN2"];
    30 [label="FCER1A"];
    31 [label="VGLL3"];
    32 [label="TRPC6"];
    33 [label="IL7"];
    34 [label="CNTN6"];
    35 [label="PLA2G1B"];
    36 [label="PTGER2"];
    37 [label="LGALS13"];
    38 [label="SH3TC2"];
    39 [label="ASCL2"];
    40 [label="CORIN"];
    41 [label="DPYS"];
    42 [label="PRDM13"];
    43 [label="HOOK1"];
    44 [label="ADAMTS20"];
    45 [label="BRCA2"];
    46 [label="CCDC69"];
    47 [label="INHBE"];
    48 [label="NFE2L3"];
    49 [label="CYP2B6"];
    50 [label="XYLB"];
    51 [label="MRC2"];
    52 [label="SEMA4C"];
    53 [label="SMYD3"];
    54 [label="RAB3IL1"];
    55 [label="MRPS14"];
    56 [label="PAF1"];
    57 [label="KIF13B"];
    58 [label="SLC25A12"];
    59 [label="ADIPOR2"];
    60 [label="DGKD"];
    61 [label="NUPL2"];
    62 [label="ACTR1A"];
    63 [label="PITPNA"];
    64 [label="SNF8"];
    65 [label="SECISBP2"];
    66 [label="TARBP1"];
    67 [label="ARHGEF17"];
    68 [label="KIF3B"];
    69 [label="TSPYL2"];
    70 [label="VAPB"];
    71 [label="TAF2"];
    72 [label="GOLGB1"];
    73 [label="SLC25A1"];
    74 [label="TBC1D5"];
    75 [label="PMF1"];
    76 [label="LHFPL2"];
    77 [label="ELP3"];
    78 [label="RHOG"];
    79 [label="CCDC25"];
    80 [label="CLK2"];
    81 [label="FAM57A"];
    82 [label="CYP27A1"];
    83 [label="METAP1"];
    84 [label="TEX261"];
    85 [label="DPAGT1"];
    86 [label="STX18"];
    87 [label="PLCD1"];
    88 [label="TMEM109"];
    89 [label="TTC1"];
    90 [label="OXA1L"];
    91 [label="ST5"];
    92 [label="TRIM26"];
    93 [label="YIPF1"];
    94 [label="GAB2"];
    95 [label="NPLOC4"];
    96 [label="VPS33B"];
    97 [label="FBXW4"];
    98 [label="MPPE1"];
    99 [label="DUSP14"];
    100 [label="FMO4"];

    37->0;
    49->0;
    88->0;
    15->1;
    48->1;
    63->1;
    88->2;
    15->3;
    98->3;
    2->4;
    94->4;
    0->5;
    44->5;
    43->6;
    51->6;
    44->7;
    74->7;
    47->8;
    74->8;
    40->9;
    94->9;
    45->10;
    0->11;
    32->11;
    51->11;
    21->12;
    89->12;
    50->13;
    55->13;
    19->14;
    27->14;
    68->14;
    17->15;
    18->15;
    95->15;
    35->16;
    71->16;
    43->17;
    55->17;
    28->18;
    98->18;
    22->19;
    41->19;
    63->19;
    89->20;
    95->20;
    53->21;
    60->21;
    6->22;
    43->22;
    6->23;
    22->23;
    69->23;
    98->24;
    32->25;
    44->25;
    2->26;
    91->26;
    64->27;
    96->27;
    22->28;
    26->29;
    28->29;
    95->29;
    33->30;
    50->30;
    20->31;
    21->31;
    6->32;
    31->32;
    60->32;
    11->33;
    53->33;
    71->33;
    28->34;
    95->34;
    98->34;
    0->35;
    92->35;
    21->36;
    28->36;
    31->36;
    74->36;
    22->37;
    91->37;
    43->38;
    98->38;
    49->39;
    70->39;
    6->40;
    41->40;
    0->41;
    47->41;
    26->42;
    43->42;
    51->43;
    91->43;
    28->44;
    72->44;
    47->45;
    90->45;
    17->46;
    36->46;
    22->47;
    42->47;
    29->48;
    60->48;
    79->48;
    47->49;
    98->49;
    15->50;
    18->50;
    96->50;
    47->52;
    67->52;
    51->53;
    68->53;
    3->54;
    88->54;
    49->55;
    59->55;
    94->56;
    95->56;
    35->57;
    49->57;
    71->58;
    81->58;
    0->59;
    75->59;
    47->60;
    81->60;
    48->61;
    92->61;
    54->62;
    49->63;
    88->63;
    37->64;
    80->64;
    28->65;
    48->65;
    69->65;
    98->66;
    20->67;
    49->67;
    51->68;
    81->68;
    37->69;
    47->69;
    55->69;
    86->69;
    31->70;
    90->71;
    91->71;
    19->72;
    95->72;
    47->73;
    64->73;
    98->74;
    20->75;
    49->75;
    88->75;
    23->76;
    78->76;
    19->77;
    69->77;
    27->78;
    69->78;
    60->79;
    89->79;
    53->80;
    81->80;
    88->81;
    67->82;
    95->82;
    55->83;
    71->83;
    39->84;
    86->84;
    54->85;
    15->86;
    67->86;
    70->86;
    67->87;
    91->87;
    51->88;
    47->89;
    71->89;
    68->90;
    80->90;
    88->91;
    54->92;
    81->92;
    51->93;
    91->93;
    33->94;
    57->94;
    45->95;
    71->95;
    95->96;
    80->97;
    26->98;
    89->98;
    97->98;
    6->99;
    84->99;
    43->100;
    74->100;
}

-----------------------------------------------------------------------------
- Banjo                        Bayesian Network Inference with Java Objects -
- Release 2.2.0                                                 15 Apr 2008 -
- Licensed from Duke University                                             -
- Copyright (c) 2005-08 by Alexander J. Hartemink                           -
- All rights reserved                                                       -
-----------------------------------------------------------------------------
- Project:                                                          Fall 2019
- User:                                                       Bernardo Jordan
- Dataset:                                           CaseControlGrade100Genes
- Notes:                                                           4 Hour Run
-----------------------------------------------------------------------------
- Settings file:                                                             
-----------------------------------------------------------------------------
- Input directory:                                         data/project/input
- Observations file:                                      CCGrade100Genes.txt
- Observation count:                                                      572
- Number of variables:                                                    101
- Variable names:                                                      inFile
- Discretization policy:                                                 none
- Exceptions to the discretization policy:                               none
-----------------------------------------------------------------------------
- Initial structure file:                                                    
- 'Must be present' edges file:                                              
- 'Must not be present' edges file:                                          
- Min. Markov lag:                                                          0
- Max. Markov lag:                                                          0
- Max. parent count:                                                        5
- Equivalent sample size for Dirichlet parameter prior:                   1.0
-----------------------------------------------------------------------------
- Searcher:                                                    SearcherGreedy
- Proposer:                                           ProposerRandomLocalMove
- Evaluator:                                        defaulted to EvaluatorBDe
- Decider:                                         defaulted to DeciderGreedy
-----------------------------------------------------------------------------
- Pre-compute logGamma:                                                   yes
- Cache:                                                           fastLevel2
- Cycle checking method:                                   Depth-first Search
-----------------------------------------------------------------------------
- Min. proposed networks after high score:                               1000
- Min. proposed networks before restart:                                 3000
- Max. proposed networks before restart:                                 5000
- Restart method:                                          use random network
-   with max. parent count:                                                 3
-----------------------------------------------------------------------------
- Output directory:                                       data/project/output
- Report file:                                                     report.txt
- Number of best networks tracked:                                          1
- Max. time:                                                            4.0 h
- Max. restarts:                                                        10000
- Min. networks before checking:                                         1000
- Screen reporting interval:                                           20.0 s
- File reporting interval:                                             10.0 m
-----------------------------------------------------------------------------
- Compute influence scores:                                               yes
- Compute consensus graph:                                                yes
- Create consensus graph as HTML:                                         yes
- Create 'dot' output:                                                    yes
- Location of 'dot':          C:/Program Files (x86)/Graphviz2.38/bin/dot.exe
-----------------------------------------------------------------------------
- XML output directory:                                   data/project/output
- XML Report file:                                                           
- XML settings to export:                                                    
- XML parser:                             org.apache.xerces.parsers.SAXParser
- Banjo XML format version:                                               1.0
-----------------------------------------------------------------------------
- Seed for starting search:                                     1574491175726
-----------------------------------------------------------------------------
- Number of threads:                                                        1
-----------------------------------------------------------------------------

Memory info before starting the search: Banjo is using 18 mb of memory
Prep. time used: 163.0 ms
Beginning to search: expect a status report every 20.0 s

Status:  Networks 1693000
         Time     20.0 s (0.1% of max. 4.0 h)
         Restarts 338 (3.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 3424000
         Time     40.0 s (0.2% of max. 4.0 h)
         Restarts 684 (6.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 5197000
         Time     1.0 m (0.4% of max. 4.0 h)
         Restarts 1039 (10.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 6973000
         Time     1.33 m (0.5% of max. 4.0 h)
         Restarts 1394 (13.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 8761000
         Time     1.67 m (0.6% of max. 4.0 h)
         Restarts 1751 (17.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 10557000
         Time     2.0 m (0.8% of max. 4.0 h)
         Restarts 2111 (21.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 12348000
         Time     2.33 m (0.9% of max. 4.0 h)
         Restarts 2469 (24.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 14142000
         Time     2.67 m (1.1% of max. 4.0 h)
         Restarts 2828 (28.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 15936000
         Time     3.0 m (1.2% of max. 4.0 h)
         Restarts 3186 (31.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 17731000
         Time     3.33 m (1.3% of max. 4.0 h)
         Restarts 3545 (35.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 19541000
         Time     3.67 m (1.5% of max. 4.0 h)
         Restarts 3907 (39.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 21348000
         Time     4.0 m (1.6% of max. 4.0 h)
         Restarts 4269 (42.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 23154000
         Time     4.33 m (1.8% of max. 4.0 h)
         Restarts 4630 (46.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 24954000
         Time     4.67 m (1.9% of max. 4.0 h)
         Restarts 4990 (49.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 26765000
         Time     5.0 m (2.0% of max. 4.0 h)
         Restarts 5352 (53.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 28567000
         Time     5.33 m (2.2% of max. 4.0 h)
         Restarts 5713 (57.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 30365000
         Time     5.67 m (2.3% of max. 4.0 h)
         Restarts 6072 (60.7% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 32164000
         Time     6.0 m (2.5% of max. 4.0 h)
         Restarts 6432 (64.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 33953000
         Time     6.33 m (2.6% of max. 4.0 h)
         Restarts 6790 (67.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 35751000
         Time     6.67 m (2.7% of max. 4.0 h)
         Restarts 7149 (71.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 37546000
         Time     7.0 m (2.9% of max. 4.0 h)
         Restarts 7508 (75.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 39343000
         Time     7.33 m (3.0% of max. 4.0 h)
         Restarts 7868 (78.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 41143000
         Time     7.67 m (3.1% of max. 4.0 h)
         Restarts 8228 (82.2% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 42945000
         Time     8.0 m (3.3% of max. 4.0 h)
         Restarts 8588 (85.8% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 44744000
         Time     8.33 m (3.4% of max. 4.0 h)
         Restarts 8948 (89.4% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 46544000
         Time     8.67 m (3.6% of max. 4.0 h)
         Restarts 9308 (93.0% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 48348000
         Time     9.0 m (3.7% of max. 4.0 h)
         Restarts 9669 (96.6% of max. 10000)
         Banjo is using 23 mb of memory



-----------------------------------------------------------------------------
- Final report                                           Best network overall
-----------------------------------------------------------------------------


Network score: -12549.9813, first found at iteration 5645934
101
  0 3 2 28 88
  1 2 29 98
  2 2 4 73
  3 3 57 63 67
  4 2 45 95
  5 3 23 85 87
  6 1 89
  7 2 34 94
  8 2 3 91
  9 3 28 49 95
 10 1 55
 11 2 33 36
 12 1 27
 13 1 55
 14 2 11 19
 15 3 4 43 44
 16 2 34 90
 17 3 14 27 54
 18 2 21 69
 19 3 4 37 60
 20 2 88 95
 21 2 6 19
 22 1 13
 23 2 38 94
 24 1 47
 25 2 0 69
 26 1 6
 27 2 45 59
 28 2 19 42
 29 2 36 94
 30 1 13
 31 2 15 20
 32 2 15 26
 33 2 7 80
 34 2 13 29
 35 2 17 18
 36 3 22 46 67
 37 2 13 41
 38 3 14 22 69
 39 3 27 36 84
 40 2 13 44
 41 1 36
 42 2 18 33
 43 1 6
 44 3 19 33 84
 45 2 59 84
 46 1 6
 47 2 28 72
 48 2 29 67
 49 3 4 79 91
 50 2 34 95
 51 2 27 54
 52 3 2 28 88
 53 2 0 50
 54 3 0 45 79
 55 2 43 94
 56 3 81 86 87
 57 3 19 45 86
 58 4 2 19 23 94
 59 3 22 84 91
 60 2 50 72
 61 2 84 97
 62 2 33 54
 63 2 88 93
 64 2 14 17
 65 2 6 88
 66 2 68 80
 67 2 69 89
 68 3 12 45 94
 69 2 13 79
 70 2 50 87
 71 2 59 87
 72 2 50 88
 73 2 30 93
 74 1 98
 75 2 20 84
 76 2 75 87
 77 1 89
 78 2 0 49
 79 2 55 98
 80 3 4 29 82
 81 2 79 98
 82 1 88
 83 2 84 95
 84 2 22 92
 85 2 54 69
 86 2 49 59
 87 2 50 80
 88 2 67 95
 89 1 94
 90 2 79 98
 91 2 36 88
 92 1 94
 93 2 68 90
 94 0
 95 2 67 98
 96 1 95
 97 2 95 100
 98 2 6 84
 99 2 82 89
100 2 43 69


-----------------------------------------------------------------------------
- Search Statistics                                                          
-----------------------------------------------------------------------------

Statistics collected in searcher 'SearcherGreedy':
  Number of networks examined: 50001000
  Total time used: 9.31 m
  High score: -12549.9813, first found at iteration 5645934
  Number of restarts: 10000

Statistics collected in proposer 'ProposerRandomLocalMove':
  Additions -- proposed:    16655505
  Deletions -- proposed:    16679853
  Reversals -- proposed:    16665641

Statistics collected in cycle checker 'CycleCheckerCheckThenApply':
  Additions -- considered:  16655505,  acyclic:  11496247
  Deletions -- no cyclicity test necessary
  Reversals -- considered:  16665641,  acyclic:  11254257

Statistics collected in evaluator 'EvaluatorBDe':
  Scores computed:          16316129
  Scores (cache)            placed         fetched        
      with 0 parents:       101            3226068        
      with 1 parents:       10100          17311042       
      with 2 parents:       492806         11227275       
      with 3 parents:       11705958       3175451        
      with 4 parents:       3780954        873793         
      with 5 parents:       326210         67964          

Statistics collected in decider 'DeciderGreedy':
  Additions -- considered:  11496247,  better score:  1737795
  Deletions -- considered:  16679853,  better score:  1390548
  Reversals -- considered:  11254257,  better score:  763339

Memory info after completing the search: Banjo is using 23 mb of memory


Network score: -12549.9813, found by thread 1
101
  0 3 2 28 88
  1 2 29 98
  2 2 4 73
  3 3 57 63 67
  4 2 45 95
  5 3 23 85 87
  6 1 89
  7 2 34 94
  8 2 3 91
  9 3 28 49 95
 10 1 55
 11 2 33 36
 12 1 27
 13 1 55
 14 2 11 19
 15 3 4 43 44
 16 2 34 90
 17 3 14 27 54
 18 2 21 69
 19 3 4 37 60
 20 2 88 95
 21 2 6 19
 22 1 13
 23 2 38 94
 24 1 47
 25 2 0 69
 26 1 6
 27 2 45 59
 28 2 19 42
 29 2 36 94
 30 1 13
 31 2 15 20
 32 2 15 26
 33 2 7 80
 34 2 13 29
 35 2 17 18
 36 3 22 46 67
 37 2 13 41
 38 3 14 22 69
 39 3 27 36 84
 40 2 13 44
 41 1 36
 42 2 18 33
 43 1 6
 44 3 19 33 84
 45 2 59 84
 46 1 6
 47 2 28 72
 48 2 29 67
 49 3 4 79 91
 50 2 34 95
 51 2 27 54
 52 3 2 28 88
 53 2 0 50
 54 3 0 45 79
 55 2 43 94
 56 3 81 86 87
 57 3 19 45 86
 58 4 2 19 23 94
 59 3 22 84 91
 60 2 50 72
 61 2 84 97
 62 2 33 54
 63 2 88 93
 64 2 14 17
 65 2 6 88
 66 2 68 80
 67 2 69 89
 68 3 12 45 94
 69 2 13 79
 70 2 50 87
 71 2 59 87
 72 2 50 88
 73 2 30 93
 74 1 98
 75 2 20 84
 76 2 75 87
 77 1 89
 78 2 0 49
 79 2 55 98
 80 3 4 29 82
 81 2 79 98
 82 1 88
 83 2 84 95
 84 2 22 92
 85 2 54 69
 86 2 49 59
 87 2 50 80
 88 2 67 95
 89 1 94
 90 2 79 98
 91 2 36 88
 92 1 94
 93 2 68 90
 94 0
 95 2 67 98
 96 1 95
 97 2 95 100
 98 2 6 84
 99 2 82 89
100 2 43 69

-----------------------------------------------------------------------------
- Post-processing                                            Influence scores
-----------------------------------------------------------------------------

Influence score for  (88,0) ->   (0,0)   -.5422
Influence score for  (28,0) ->   (0,0)   -.1050
Influence score for   (2,0) ->   (0,0)   .3866
Influence score for  (98,0) ->   (1,0)   -.3120
Influence score for  (29,0) ->   (1,0)   .0458
Influence score for  (73,0) ->   (2,0)   .0000
Influence score for   (4,0) ->   (2,0)   .4783
Influence score for  (67,0) ->   (3,0)   -.1111
Influence score for  (63,0) ->   (3,0)   -.2218
Influence score for  (57,0) ->   (3,0)   -.1111
Influence score for  (95,0) ->   (4,0)   .0007
Influence score for  (45,0) ->   (4,0)   .0000
Influence score for  (87,0) ->   (5,0)   -.1011
Influence score for  (85,0) ->   (5,0)   .0000
Influence score for  (23,0) ->   (5,0)   .0000
Influence score for  (89,0) ->   (6,0)   -.4858
Influence score for  (94,0) ->   (7,0)   .0000
Influence score for  (34,0) ->   (7,0)   .1667
Influence score for  (91,0) ->   (8,0)   -.1519
Influence score for   (3,0) ->   (8,0)   .3346
Influence score for  (95,0) ->   (9,0)   -.3465
Influence score for  (49,0) ->   (9,0)   .0000
Influence score for  (28,0) ->   (9,0)   -.1929
Influence score for  (55,0) ->  (10,0)   -.2850
Influence score for  (36,0) ->  (11,0)   .1515
Influence score for  (33,0) ->  (11,0)   .4206
Influence score for  (27,0) ->  (12,0)   .0000
Influence score for  (55,0) ->  (13,0)   .0000
Influence score for  (19,0) ->  (14,0)   .4998
Influence score for  (11,0) ->  (14,0)   .1664
Influence score for  (44,0) ->  (15,0)   .1106
Influence score for  (43,0) ->  (15,0)   .1673
Influence score for   (4,0) ->  (15,0)   .1111
Influence score for  (90,0) ->  (16,0)   -.2846
Influence score for  (34,0) ->  (16,0)   .2846
Influence score for  (54,0) ->  (17,0)   .0000
Influence score for  (27,0) ->  (17,0)   .1110
Influence score for  (14,0) ->  (17,0)   .1110
Influence score for  (69,0) ->  (18,0)   -.2768
Influence score for  (21,0) ->  (18,0)   .1599
Influence score for  (60,0) ->  (19,0)   -.2197
Influence score for  (37,0) ->  (19,0)   .2345
Influence score for   (4,0) ->  (19,0)   .2219
Influence score for  (95,0) ->  (20,0)   -.2568
Influence score for  (88,0) ->  (20,0)   -.1392
Influence score for  (19,0) ->  (21,0)   .3253
Influence score for   (6,0) ->  (21,0)   .3253
Influence score for  (13,0) ->  (22,0)   .4734
Influence score for  (94,0) ->  (23,0)   .1667
Influence score for  (38,0) ->  (23,0)   .3331
Influence score for  (47,0) ->  (24,0)   .2805
Influence score for  (69,0) ->  (25,0)   -.3979
Influence score for   (0,0) ->  (25,0)   .0000
Influence score for   (6,0) ->  (26,0)   .0000
Influence score for  (59,0) ->  (27,0)   -.2283
Influence score for  (45,0) ->  (27,0)   .3331
Influence score for  (42,0) ->  (28,0)   .2888
Influence score for  (19,0) ->  (28,0)   .0167
Influence score for  (94,0) ->  (29,0)   -.3310
Influence score for  (36,0) ->  (29,0)   .3310
Influence score for  (13,0) ->  (30,0)   .0000
Influence score for  (20,0) ->  (31,0)   .1581
Influence score for  (15,0) ->  (31,0)   .3564
Influence score for  (26,0) ->  (32,0)   .3221
Influence score for  (15,0) ->  (32,0)   .3221
Influence score for  (80,0) ->  (33,0)   -.3331
Influence score for   (7,0) ->  (33,0)   .4475
Influence score for  (29,0) ->  (34,0)   .0000
Influence score for  (13,0) ->  (34,0)   .3274
Influence score for  (18,0) ->  (35,0)   .0000
Influence score for  (17,0) ->  (35,0)   .3310
Influence score for  (67,0) ->  (36,0)   .0000
Influence score for  (46,0) ->  (36,0)   .2142
Influence score for  (22,0) ->  (36,0)   .2142
Influence score for  (41,0) ->  (37,0)   .3157
Influence score for  (13,0) ->  (37,0)   .3157
Influence score for  (69,0) ->  (38,0)   -.1104
Influence score for  (22,0) ->  (38,0)   .0000
Influence score for  (14,0) ->  (38,0)   .0000
Influence score for  (84,0) ->  (39,0)   -.0885
Influence score for  (36,0) ->  (39,0)   .1286
Influence score for  (27,0) ->  (39,0)   .0000
Influence score for  (44,0) ->  (40,0)   .1288
Influence score for  (13,0) ->  (40,0)   .3259
Influence score for  (36,0) ->  (41,0)   .4862
Influence score for  (33,0) ->  (42,0)   -.1667
Influence score for  (18,0) ->  (42,0)   .4127
Influence score for   (6,0) ->  (43,0)   .0000
Influence score for  (84,0) ->  (44,0)   .1459
Influence score for  (33,0) ->  (44,0)   .1666
Influence score for  (19,0) ->  (44,0)   .1666
Influence score for  (84,0) ->  (45,0)   -.1535
Influence score for  (59,0) ->  (45,0)   -.4995
Influence score for   (6,0) ->  (46,0)   .0000
Influence score for  (72,0) ->  (47,0)   -.4985
Influence score for  (28,0) ->  (47,0)   .0010
Influence score for  (67,0) ->  (48,0)   -.2618
Influence score for  (29,0) ->  (48,0)   .0000
Influence score for  (91,0) ->  (49,0)   -.1111
Influence score for  (79,0) ->  (49,0)   .0000
Influence score for   (4,0) ->  (49,0)   .0698
Influence score for  (95,0) ->  (50,0)   .0943
Influence score for  (34,0) ->  (50,0)   .4995
Influence score for  (54,0) ->  (51,0)   .0000
Influence score for  (27,0) ->  (51,0)   .0000
Influence score for  (88,0) ->  (52,0)   .2472
Influence score for  (28,0) ->  (52,0)   -.2452
Influence score for   (2,0) ->  (52,0)   .1239
Influence score for  (50,0) ->  (53,0)   .1083
Influence score for   (0,0) ->  (53,0)   .0000
Influence score for  (79,0) ->  (54,0)   .0000
Influence score for  (45,0) ->  (54,0)   -.0333
Influence score for   (0,0) ->  (54,0)   .0000
Influence score for  (94,0) ->  (55,0)   .1664
Influence score for  (43,0) ->  (55,0)   .0000
Influence score for  (87,0) ->  (56,0)   .0000
Influence score for  (86,0) ->  (56,0)   -.0556
Influence score for  (81,0) ->  (56,0)   -.0556
Influence score for  (86,0) ->  (57,0)   -.0542
Influence score for  (45,0) ->  (57,0)   .0302
Influence score for  (19,0) ->  (57,0)   .0000
Influence score for  (94,0) ->  (58,0)   .0000
Influence score for  (23,0) ->  (58,0)   .0234
Influence score for  (19,0) ->  (58,0)   .0000
Influence score for   (2,0) ->  (58,0)   .0055
Influence score for  (91,0) ->  (59,0)   -.3333
Influence score for  (84,0) ->  (59,0)   .1111
Influence score for  (22,0) ->  (59,0)   -.0229
Influence score for  (72,0) ->  (60,0)   .1664
Influence score for  (50,0) ->  (60,0)   .0000
Influence score for  (97,0) ->  (61,0)   .0000
Influence score for  (84,0) ->  (61,0)   .2427
Influence score for  (54,0) ->  (62,0)   .3556
Influence score for  (33,0) ->  (62,0)   -.1373
Influence score for  (93,0) ->  (63,0)   .0000
Influence score for  (88,0) ->  (63,0)   .1238
Influence score for  (17,0) ->  (64,0)   .0000
Influence score for  (14,0) ->  (64,0)   .0000
Influence score for  (88,0) ->  (65,0)   .0756
Influence score for   (6,0) ->  (65,0)   .0000
Influence score for  (80,0) ->  (66,0)   .1550
Influence score for  (68,0) ->  (66,0)   .0000
Influence score for  (89,0) ->  (67,0)   .0000
Influence score for  (69,0) ->  (67,0)   .0000
Influence score for  (94,0) ->  (68,0)   .0556
Influence score for  (45,0) ->  (68,0)   .0000
Influence score for  (12,0) ->  (68,0)   -.0171
Influence score for  (79,0) ->  (69,0)   .0000
Influence score for  (13,0) ->  (69,0)   .0000
Influence score for  (87,0) ->  (70,0)   .0000
Influence score for  (50,0) ->  (70,0)   .0000
Influence score for  (87,0) ->  (71,0)   .0000
Influence score for  (59,0) ->  (71,0)   .0000
Influence score for  (88,0) ->  (72,0)   .2072
Influence score for  (50,0) ->  (72,0)   .0000
Influence score for  (93,0) ->  (73,0)   -.1667
Influence score for  (30,0) ->  (73,0)   .0000
Influence score for  (98,0) ->  (74,0)   .0000
Influence score for  (84,0) ->  (75,0)   .1395
Influence score for  (20,0) ->  (75,0)   -.4025
Influence score for  (87,0) ->  (76,0)   .0771
Influence score for  (75,0) ->  (76,0)   .0000
Influence score for  (89,0) ->  (77,0)   .0000
Influence score for  (49,0) ->  (78,0)   .0000
Influence score for   (0,0) ->  (78,0)   .0000
Influence score for  (98,0) ->  (79,0)   .0000
Influence score for  (55,0) ->  (79,0)   .0000
Influence score for  (82,0) ->  (80,0)   .0000
Influence score for  (29,0) ->  (80,0)   .0000
Influence score for   (4,0) ->  (80,0)   .0000
Influence score for  (98,0) ->  (81,0)   .0000
Influence score for  (79,0) ->  (81,0)   .0000
Influence score for  (88,0) ->  (82,0)   .4974
Influence score for  (95,0) ->  (83,0)   .2324
Influence score for  (84,0) ->  (83,0)   .1973
Influence score for  (92,0) ->  (84,0)   .1882
Influence score for  (22,0) ->  (84,0)   .0000
Influence score for  (69,0) ->  (85,0)   .0000
Influence score for  (54,0) ->  (85,0)   .0000
Influence score for  (59,0) ->  (86,0)   .0000
Influence score for  (49,0) ->  (86,0)   .0000
Influence score for  (80,0) ->  (87,0)   .0000
Influence score for  (50,0) ->  (87,0)   .0000
Influence score for  (95,0) ->  (88,0)   .2949
Influence score for  (67,0) ->  (88,0)   .3224
Influence score for  (94,0) ->  (89,0)   .0000
Influence score for  (98,0) ->  (90,0)   .0000
Influence score for  (79,0) ->  (90,0)   .0000
Influence score for  (88,0) ->  (91,0)   .0000
Influence score for  (36,0) ->  (91,0)   -.0595
Influence score for  (94,0) ->  (92,0)   .5328
Influence score for  (90,0) ->  (93,0)   .0000
Influence score for  (68,0) ->  (93,0)   .1433
Influence score for  (98,0) ->  (95,0)   .0000
Influence score for  (67,0) ->  (95,0)   .6492
Influence score for  (95,0) ->  (96,0)   .4114
Influence score for   (100,0) ->  (97,0)   .0000
Influence score for  (95,0) ->  (97,0)   .4633
Influence score for  (84,0) ->  (98,0)   .3337
Influence score for   (6,0) ->  (98,0)   .0000
Influence score for  (89,0) ->  (99,0)   .0000
Influence score for  (82,0) ->  (99,0)   .0000
Influence score for  (69,0) ->   (100,0)   -.0265
Influence score for  (43,0) ->   (100,0)   -.2901

-----------------------------------------------------------------------------
- Post-processing                                  DOT graphics format output
-----------------------------------------------------------------------------

digraph abstract { 

label = "Banjo Version 2.2.0\nHigh scoring network, score: -12549.9813\nProject: Fall 2019\nUser: Bernardo Jordan\nDataset: CaseControlGrade100Genes"; 
labeljust="l"; 

    0 [label="DiseaseGrade"];
    1 [label="RAVER2"];
    2 [label="YAF2"];
    3 [label="TRPC3"];
    4 [label="ZNF7"];
    5 [label="PARD6B"];
    6 [label="CYP4F8"];
    7 [label="ABCD2"];
    8 [label="NIPSNAP3B"];
    9 [label="CA8"];
    10 [label="EFHC2"];
    11 [label="CXCL5"];
    12 [label="MATN3"];
    13 [label="TLL1"];
    14 [label="MYO1D"];
    15 [label="GALR2"];
    16 [label="SIDT1"];
    17 [label="SIM1"];
    18 [label="PLCH1"];
    19 [label="MSX2"];
    20 [label="ZNF442"];
    21 [label="GREM2"];
    22 [label="CDH9"];
    23 [label="ADRA1B"];
    24 [label="EGF"];
    25 [label="MMP10"];
    26 [label="ZNF165"];
    27 [label="ZNF257"];
    28 [label="DRD1"];
    29 [label="TSPAN2"];
    30 [label="FCER1A"];
    31 [label="VGLL3"];
    32 [label="TRPC6"];
    33 [label="IL7"];
    34 [label="CNTN6"];
    35 [label="PLA2G1B"];
    36 [label="PTGER2"];
    37 [label="LGALS13"];
    38 [label="SH3TC2"];
    39 [label="ASCL2"];
    40 [label="CORIN"];
    41 [label="DPYS"];
    42 [label="PRDM13"];
    43 [label="HOOK1"];
    44 [label="ADAMTS20"];
    45 [label="BRCA2"];
    46 [label="CCDC69"];
    47 [label="INHBE"];
    48 [label="NFE2L3"];
    49 [label="CYP2B6"];
    50 [label="XYLB"];
    51 [label="MRC2"];
    52 [label="SEMA4C"];
    53 [label="SMYD3"];
    54 [label="RAB3IL1"];
    55 [label="MRPS14"];
    56 [label="PAF1"];
    57 [label="KIF13B"];
    58 [label="SLC25A12"];
    59 [label="ADIPOR2"];
    60 [label="DGKD"];
    61 [label="NUPL2"];
    62 [label="ACTR1A"];
    63 [label="PITPNA"];
    64 [label="SNF8"];
    65 [label="SECISBP2"];
    66 [label="TARBP1"];
    67 [label="ARHGEF17"];
    68 [label="KIF3B"];
    69 [label="TSPYL2"];
    70 [label="VAPB"];
    71 [label="TAF2"];
    72 [label="GOLGB1"];
    73 [label="SLC25A1"];
    74 [label="TBC1D5"];
    75 [label="PMF1"];
    76 [label="LHFPL2"];
    77 [label="ELP3"];
    78 [label="RHOG"];
    79 [label="CCDC25"];
    80 [label="CLK2"];
    81 [label="FAM57A"];
    82 [label="CYP27A1"];
    83 [label="METAP1"];
    84 [label="TEX261"];
    85 [label="DPAGT1"];
    86 [label="STX18"];
    87 [label="PLCD1"];
    88 [label="TMEM109"];
    89 [label="TTC1"];
    90 [label="OXA1L"];
    91 [label="ST5"];
    92 [label="TRIM26"];
    93 [label="YIPF1"];
    94 [label="GAB2"];
    95 [label="NPLOC4"];
    96 [label="VPS33B"];
    97 [label="FBXW4"];
    98 [label="MPPE1"];
    99 [label="DUSP14"];
    100 [label="FMO4"];

    2->0;
    28->0;
    88->0;
    29->1;
    98->1;
    4->2;
    73->2;
    57->3;
    63->3;
    67->3;
    45->4;
    95->4;
    23->5;
    85->5;
    87->5;
    89->6;
    34->7;
    94->7;
    3->8;
    91->8;
    28->9;
    49->9;
    95->9;
    55->10;
    33->11;
    36->11;
    27->12;
    55->13;
    11->14;
    19->14;
    4->15;
    43->15;
    44->15;
    34->16;
    90->16;
    14->17;
    27->17;
    54->17;
    21->18;
    69->18;
    4->19;
    37->19;
    60->19;
    88->20;
    95->20;
    6->21;
    19->21;
    13->22;
    38->23;
    94->23;
    47->24;
    0->25;
    69->25;
    6->26;
    45->27;
    59->27;
    19->28;
    42->28;
    36->29;
    94->29;
    13->30;
    15->31;
    20->31;
    15->32;
    26->32;
    7->33;
    80->33;
    13->34;
    29->34;
    17->35;
    18->35;
    22->36;
    46->36;
    67->36;
    13->37;
    41->37;
    14->38;
    22->38;
    69->38;
    27->39;
    36->39;
    84->39;
    13->40;
    44->40;
    36->41;
    18->42;
    33->42;
    6->43;
    19->44;
    33->44;
    84->44;
    59->45;
    84->45;
    6->46;
    28->47;
    72->47;
    29->48;
    67->48;
    4->49;
    79->49;
    91->49;
    34->50;
    95->50;
    27->51;
    54->51;
    2->52;
    28->52;
    88->52;
    0->53;
    50->53;
    0->54;
    45->54;
    79->54;
    43->55;
    94->55;
    81->56;
    86->56;
    87->56;
    19->57;
    45->57;
    86->57;
    2->58;
    19->58;
    23->58;
    94->58;
    22->59;
    84->59;
    91->59;
    50->60;
    72->60;
    84->61;
    97->61;
    33->62;
    54->62;
    88->63;
    93->63;
    14->64;
    17->64;
    6->65;
    88->65;
    68->66;
    80->66;
    69->67;
    89->67;
    12->68;
    45->68;
    94->68;
    13->69;
    79->69;
    50->70;
    87->70;
    59->71;
    87->71;
    50->72;
    88->72;
    30->73;
    93->73;
    98->74;
    20->75;
    84->75;
    75->76;
    87->76;
    89->77;
    0->78;
    49->78;
    55->79;
    98->79;
    4->80;
    29->80;
    82->80;
    79->81;
    98->81;
    88->82;
    84->83;
    95->83;
    22->84;
    92->84;
    54->85;
    69->85;
    49->86;
    59->86;
    50->87;
    80->87;
    67->88;
    95->88;
    94->89;
    79->90;
    98->90;
    36->91;
    88->91;
    94->92;
    68->93;
    90->93;
    67->95;
    98->95;
    95->96;
    95->97;
    100->97;
    6->98;
    84->98;
    82->99;
    89->99;
    43->100;
    69->100;
}

-----------------------------------------------------------------------------
- Banjo                        Bayesian Network Inference with Java Objects -
- Release 2.2.0                                                 15 Apr 2008 -
- Licensed from Duke University                                             -
- Copyright (c) 2005-08 by Alexander J. Hartemink                           -
- All rights reserved                                                       -
-----------------------------------------------------------------------------
- Project:                                                          Fall 2019
- User:                                                       Bernardo Jordan
- Dataset:                                           CaseControlGrade100Genes
- Notes:                                                           8 Hour Run
-----------------------------------------------------------------------------
- Settings file:                                                             
-----------------------------------------------------------------------------
- Input directory:                                         data/project/input
- Observations file:                                      CCGrade100Genes.txt
- Observation count:                                                      572
- Number of variables:                                                    101
- Variable names:                                                      inFile
- Discretization policy:                                                 none
- Exceptions to the discretization policy:                               none
-----------------------------------------------------------------------------
- Initial structure file:                                                    
- 'Must be present' edges file:                                              
- 'Must not be present' edges file:                                          
- Min. Markov lag:                                                          0
- Max. Markov lag:                                                          0
- Max. parent count:                                                        5
- Equivalent sample size for Dirichlet parameter prior:                   1.0
-----------------------------------------------------------------------------
- Searcher:                                                    SearcherGreedy
- Proposer:                                           ProposerRandomLocalMove
- Evaluator:                                        defaulted to EvaluatorBDe
- Decider:                                         defaulted to DeciderGreedy
-----------------------------------------------------------------------------
- Pre-compute logGamma:                                                   yes
- Cache:                                                           fastLevel2
- Cycle checking method:                                   Depth-first Search
-----------------------------------------------------------------------------
- Min. proposed networks after high score:                               1000
- Min. proposed networks before restart:                                 3000
- Max. proposed networks before restart:                                 5000
- Restart method:                                          use random network
-   with max. parent count:                                                 3
-----------------------------------------------------------------------------
- Output directory:                                       data/project/output
- Report file:                                                     report.txt
- Number of best networks tracked:                                          1
- Max. time:                                                            8.0 h
- Max. restarts:                                                        10000
- Min. networks before checking:                                         1000
- Screen reporting interval:                                           20.0 s
- File reporting interval:                                             10.0 m
-----------------------------------------------------------------------------
- Compute influence scores:                                               yes
- Compute consensus graph:                                                yes
- Create consensus graph as HTML:                                         yes
- Create 'dot' output:                                                    yes
- Location of 'dot':          C:/Program Files (x86)/Graphviz2.38/bin/dot.exe
-----------------------------------------------------------------------------
- XML output directory:                                   data/project/output
- XML Report file:                                                           
- XML settings to export:                                                    
- XML parser:                             org.apache.xerces.parsers.SAXParser
- Banjo XML format version:                                               1.0
-----------------------------------------------------------------------------
- Seed for starting search:                                     1574528518173
-----------------------------------------------------------------------------
- Number of threads:                                                        1
-----------------------------------------------------------------------------

Memory info before starting the search: Banjo is using 18 mb of memory
Prep. time used: 162.0 ms
Beginning to search: expect a status report every 20.0 s

Status:  Networks 1701000
         Time     20.0 s (0.0% of max. 8.0 h)
         Restarts 339 (3.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 3454000
         Time     40.01 s (0.1% of max. 8.0 h)
         Restarts 690 (6.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 5235000
         Time     1.0 m (0.2% of max. 8.0 h)
         Restarts 1046 (10.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 7021000
         Time     1.33 m (0.2% of max. 8.0 h)
         Restarts 1403 (14.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 8810000
         Time     1.67 m (0.3% of max. 8.0 h)
         Restarts 1761 (17.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 10609000
         Time     2.0 m (0.4% of max. 8.0 h)
         Restarts 2121 (21.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 12407000
         Time     2.33 m (0.4% of max. 8.0 h)
         Restarts 2481 (24.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 14207000
         Time     2.67 m (0.5% of max. 8.0 h)
         Restarts 2841 (28.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 16011000
         Time     3.0 m (0.6% of max. 8.0 h)
         Restarts 3201 (32.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 17812000
         Time     3.33 m (0.6% of max. 8.0 h)
         Restarts 3562 (35.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 19608000
         Time     3.67 m (0.7% of max. 8.0 h)
         Restarts 3921 (39.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 21409000
         Time     4.0 m (0.8% of max. 8.0 h)
         Restarts 4281 (42.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 23209000
         Time     4.33 m (0.9% of max. 8.0 h)
         Restarts 4641 (46.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 25004000
         Time     4.67 m (0.9% of max. 8.0 h)
         Restarts 5000 (50.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 26811000
         Time     5.0 m (1.0% of max. 8.0 h)
         Restarts 5361 (53.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 28622000
         Time     5.33 m (1.1% of max. 8.0 h)
         Restarts 5724 (57.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 30436000
         Time     5.67 m (1.1% of max. 8.0 h)
         Restarts 6086 (60.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 32255000
         Time     6.0 m (1.2% of max. 8.0 h)
         Restarts 6450 (64.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 34066000
         Time     6.33 m (1.3% of max. 8.0 h)
         Restarts 6812 (68.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 35871000
         Time     6.67 m (1.3% of max. 8.0 h)
         Restarts 7173 (71.7% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 37680000
         Time     7.0 m (1.4% of max. 8.0 h)
         Restarts 7535 (75.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 39483000
         Time     7.33 m (1.5% of max. 8.0 h)
         Restarts 7896 (78.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 41289000
         Time     7.67 m (1.5% of max. 8.0 h)
         Restarts 8257 (82.5% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 43101000
         Time     8.0 m (1.6% of max. 8.0 h)
         Restarts 8619 (86.1% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 44907000
         Time     8.33 m (1.7% of max. 8.0 h)
         Restarts 8981 (89.8% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 46717000
         Time     8.67 m (1.8% of max. 8.0 h)
         Restarts 9343 (93.4% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 48529000
         Time     9.0 m (1.8% of max. 8.0 h)
         Restarts 9705 (97.0% of max. 10000)
         Banjo is using 23 mb of memory



-----------------------------------------------------------------------------
- Final report                                           Best network overall
-----------------------------------------------------------------------------


Network score: -12583.2209, first found at iteration 1790947
101
  0 3 14 20 47
  1 2 7 11
  2 2 45 49
  3 4 38 53 54 84
  4 2 52 94
  5 2 80 95
  6 2 22 60
  7 2 19 38
  8 2 0 50
  9 2 14 98
 10 1 64
 11 1 6
 12 2 43 89
 13 4 12 40 43 84
 14 2 11 21
 15 3 32 36 90
 16 2 69 90
 17 3 2 7 46
 18 2 21 94
 19 2 50 60
 20 1 95
 21 2 7 43
 22 1 19
 23 3 21 24 45
 24 2 18 40
 25 2 17 43
 26 2 13 84
 27 2 6 68
 28 3 43 45 48
 29 3 5 44 46
 30 2 13 67
 31 2 8 70
 32 2 6 22
 33 3 6 43 84
 34 2 28 95
 35 3 28 47 82
 36 3 22 39 44
 37 2 19 36
 38 2 27 40
 39 2 11 27
 40 1 19
 41 1 44
 42 2 19 55
 43 1 22
 44 3 25 42 94
 45 2 50 94
 46 2 18 42
 47 3 23 60 98
 48 3 1 42 55
 49 3 7 83 84
 50 1 60
 51 2 33 87
 52 3 25 72 97
 53 2 65 84
 54 2 49 71
 55 2 33 67
 56 2 4 44
 57 2 5 78
 58 1 98
 59 2 9 23
 60 0
 61 3 13 69 97
 62 3 5 19 49
 63 3 2 67 84
 64 2 13 88
 65 2 84 89
 66 2 68 90
 67 2 39 45
 68 2 6 60
 69 2 45 81
 70 2 4 45
 71 2 20 46
 72 2 3 15
 73 1 45
 74 2 78 79
 75 3 44 84 86
 76 3 84 94 100
 77 2 52 90
 78 1 98
 79 2 27 54
 80 2 19 82
 81 3 6 28 86
 82 2 33 53
 83 2 33 45
 84 2 7 99
 85 2 45 76
 86 2 71 98
 87 2 3 19
 88 3 1 12 84
 89 2 14 20
 90 2 48 79
 91 4 39 56 62 63
 92 3 54 86 88
 93 1 98
 94 2 5 11
 95 3 50 99 100
 96 1 20
 97 3 2 84 94
 98 2 54 87
 99 1 68
100 2 68 84


-----------------------------------------------------------------------------
- Search Statistics                                                          
-----------------------------------------------------------------------------

Statistics collected in searcher 'SearcherGreedy':
  Number of networks examined: 50001000
  Total time used: 9.27 m
  High score: -12583.2209, first found at iteration 1790947
  Number of restarts: 10000

Statistics collected in proposer 'ProposerRandomLocalMove':
  Additions -- proposed:    16658878
  Deletions -- proposed:    16674840
  Reversals -- proposed:    16667281

Statistics collected in cycle checker 'CycleCheckerCheckThenApply':
  Additions -- considered:  16658878,  acyclic:  11502573
  Deletions -- no cyclicity test necessary
  Reversals -- considered:  16667281,  acyclic:  11262587

Statistics collected in evaluator 'EvaluatorBDe':
  Scores computed:          16322348
  Scores (cache)            placed         fetched        
      with 0 parents:       101            3231019        
      with 1 parents:       10100          17306662       
      with 2 parents:       492904         11236881       
      with 3 parents:       11712159       3174639        
      with 4 parents:       3781419        875914         
      with 5 parents:       325665         68330          

Statistics collected in decider 'DeciderGreedy':
  Additions -- considered:  11502573,  better score:  1738382
  Deletions -- considered:  16674840,  better score:  1389879
  Reversals -- considered:  11262587,  better score:  764899

Memory info after completing the search: Banjo is using 23 mb of memory


Network score: -12583.2209, found by thread 1
101
  0 3 14 20 47
  1 2 7 11
  2 2 45 49
  3 4 38 53 54 84
  4 2 52 94
  5 2 80 95
  6 2 22 60
  7 2 19 38
  8 2 0 50
  9 2 14 98
 10 1 64
 11 1 6
 12 2 43 89
 13 4 12 40 43 84
 14 2 11 21
 15 3 32 36 90
 16 2 69 90
 17 3 2 7 46
 18 2 21 94
 19 2 50 60
 20 1 95
 21 2 7 43
 22 1 19
 23 3 21 24 45
 24 2 18 40
 25 2 17 43
 26 2 13 84
 27 2 6 68
 28 3 43 45 48
 29 3 5 44 46
 30 2 13 67
 31 2 8 70
 32 2 6 22
 33 3 6 43 84
 34 2 28 95
 35 3 28 47 82
 36 3 22 39 44
 37 2 19 36
 38 2 27 40
 39 2 11 27
 40 1 19
 41 1 44
 42 2 19 55
 43 1 22
 44 3 25 42 94
 45 2 50 94
 46 2 18 42
 47 3 23 60 98
 48 3 1 42 55
 49 3 7 83 84
 50 1 60
 51 2 33 87
 52 3 25 72 97
 53 2 65 84
 54 2 49 71
 55 2 33 67
 56 2 4 44
 57 2 5 78
 58 1 98
 59 2 9 23
 60 0
 61 3 13 69 97
 62 3 5 19 49
 63 3 2 67 84
 64 2 13 88
 65 2 84 89
 66 2 68 90
 67 2 39 45
 68 2 6 60
 69 2 45 81
 70 2 4 45
 71 2 20 46
 72 2 3 15
 73 1 45
 74 2 78 79
 75 3 44 84 86
 76 3 84 94 100
 77 2 52 90
 78 1 98
 79 2 27 54
 80 2 19 82
 81 3 6 28 86
 82 2 33 53
 83 2 33 45
 84 2 7 99
 85 2 45 76
 86 2 71 98
 87 2 3 19
 88 3 1 12 84
 89 2 14 20
 90 2 48 79
 91 4 39 56 62 63
 92 3 54 86 88
 93 1 98
 94 2 5 11
 95 3 50 99 100
 96 1 20
 97 3 2 84 94
 98 2 54 87
 99 1 68
100 2 68 84

-----------------------------------------------------------------------------
- Post-processing                                            Influence scores
-----------------------------------------------------------------------------

Influence score for  (47,0) ->   (0,0)   -.0556
Influence score for  (20,0) ->   (0,0)   .1456
Influence score for  (14,0) ->   (0,0)   .0000
Influence score for  (11,0) ->   (1,0)   .1899
Influence score for   (7,0) ->   (1,0)   .3171
Influence score for  (49,0) ->   (2,0)   .3227
Influence score for  (45,0) ->   (2,0)   .0000
Influence score for  (84,0) ->   (3,0)   .2037
Influence score for  (54,0) ->   (3,0)   -.0277
Influence score for  (53,0) ->   (3,0)   -.0830
Influence score for  (38,0) ->   (3,0)   .1110
Influence score for  (94,0) ->   (4,0)   -.3203
Influence score for  (52,0) ->   (4,0)   -.1536
Influence score for  (95,0) ->   (5,0)   -.1706
Influence score for  (80,0) ->   (5,0)   .0000
Influence score for  (60,0) ->   (6,0)   .0000
Influence score for  (22,0) ->   (6,0)   .0000
Influence score for  (38,0) ->   (7,0)   .3128
Influence score for  (19,0) ->   (7,0)   .3128
Influence score for  (50,0) ->   (8,0)   .3887
Influence score for   (0,0) ->   (8,0)   .0000
Influence score for  (98,0) ->   (9,0)   -.3248
Influence score for  (14,0) ->   (9,0)   .3248
Influence score for  (64,0) ->  (10,0)   .0000
Influence score for   (6,0) ->  (11,0)   .0000
Influence score for  (89,0) ->  (12,0)   -.5560
Influence score for  (43,0) ->  (12,0)   .0000
Influence score for  (84,0) ->  (13,0)   .0820
Influence score for  (43,0) ->  (13,0)   .1496
Influence score for  (40,0) ->  (13,0)   .1496
Influence score for  (12,0) ->  (13,0)   .0278
Influence score for  (21,0) ->  (14,0)   .4998
Influence score for  (11,0) ->  (14,0)   .1664
Influence score for  (90,0) ->  (15,0)   -.2202
Influence score for  (36,0) ->  (15,0)   .2019
Influence score for  (32,0) ->  (15,0)   .1111
Influence score for  (90,0) ->  (16,0)   -.6084
Influence score for  (69,0) ->  (16,0)   .0000
Influence score for  (46,0) ->  (17,0)   .0999
Influence score for   (7,0) ->  (17,0)   .0000
Influence score for   (2,0) ->  (17,0)   .2202
Influence score for  (94,0) ->  (18,0)   -.5092
Influence score for  (21,0) ->  (18,0)   .0000
Influence score for  (60,0) ->  (19,0)   -.3282
Influence score for  (50,0) ->  (19,0)   .3282
Influence score for  (95,0) ->  (20,0)   -.5089
Influence score for  (43,0) ->  (21,0)   .3310
Influence score for   (7,0) ->  (21,0)   .3310
Influence score for  (19,0) ->  (22,0)   .0000
Influence score for  (45,0) ->  (23,0)   .1666
Influence score for  (24,0) ->  (23,0)   .1111
Influence score for  (21,0) ->  (23,0)   .1111
Influence score for  (40,0) ->  (24,0)   .2546
Influence score for  (18,0) ->  (24,0)   .2546
Influence score for  (43,0) ->  (25,0)   .3236
Influence score for  (17,0) ->  (25,0)   .3236
Influence score for  (84,0) ->  (26,0)   -.0715
Influence score for  (13,0) ->  (26,0)   .0992
Influence score for  (68,0) ->  (27,0)   -.3331
Influence score for   (6,0) ->  (27,0)   .3331
Influence score for  (48,0) ->  (28,0)   .0715
Influence score for  (45,0) ->  (28,0)   .0492
Influence score for  (43,0) ->  (28,0)   .4167
Influence score for  (46,0) ->  (29,0)   .2202
Influence score for  (44,0) ->  (29,0)   .1109
Influence score for   (5,0) ->  (29,0)   .2220
Influence score for  (67,0) ->  (30,0)   .1955
Influence score for  (13,0) ->  (30,0)   .0000
Influence score for  (70,0) ->  (31,0)   -.3268
Influence score for   (8,0) ->  (31,0)   .1695
Influence score for  (22,0) ->  (32,0)   .1667
Influence score for   (6,0) ->  (32,0)   .0000
Influence score for  (84,0) ->  (33,0)   -.0357
Influence score for  (43,0) ->  (33,0)   .1666
Influence score for   (6,0) ->  (33,0)   .4526
Influence score for  (95,0) ->  (34,0)   -.1011
Influence score for  (28,0) ->  (34,0)   .1657
Influence score for  (82,0) ->  (35,0)   -.3281
Influence score for  (47,0) ->  (35,0)   .0000
Influence score for  (28,0) ->  (35,0)   -.1237
Influence score for  (44,0) ->  (36,0)   .2065
Influence score for  (39,0) ->  (36,0)   .1103
Influence score for  (22,0) ->  (36,0)   .2063
Influence score for  (36,0) ->  (37,0)   .3193
Influence score for  (19,0) ->  (37,0)   .3193
Influence score for  (40,0) ->  (38,0)   .3773
Influence score for  (27,0) ->  (38,0)   .3220
Influence score for  (27,0) ->  (39,0)   .3107
Influence score for  (11,0) ->  (39,0)   .3107
Influence score for  (19,0) ->  (40,0)   .0000
Influence score for  (44,0) ->  (41,0)   .0000
Influence score for  (55,0) ->  (42,0)   -.3113
Influence score for  (19,0) ->  (42,0)   .3113
Influence score for  (22,0) ->  (43,0)   .0000
Influence score for  (94,0) ->  (44,0)   -.1111
Influence score for  (42,0) ->  (44,0)   .1111
Influence score for  (25,0) ->  (44,0)   .2036
Influence score for  (94,0) ->  (45,0)   .0000
Influence score for  (50,0) ->  (45,0)   .3331
Influence score for  (42,0) ->  (46,0)   .3034
Influence score for  (18,0) ->  (46,0)   .3034
Influence score for  (98,0) ->  (47,0)   -.0555
Influence score for  (60,0) ->  (47,0)   -.1111
Influence score for  (23,0) ->  (47,0)   .0000
Influence score for  (55,0) ->  (48,0)   -.1933
Influence score for  (42,0) ->  (48,0)   .0867
Influence score for   (1,0) ->  (48,0)   .2175
Influence score for  (84,0) ->  (49,0)   -.0915
Influence score for  (83,0) ->  (49,0)   -.1666
Influence score for   (7,0) ->  (49,0)   .1666
Influence score for  (60,0) ->  (50,0)   -.4887
Influence score for  (87,0) ->  (51,0)   .0000
Influence score for  (33,0) ->  (51,0)   -.1667
Influence score for  (97,0) ->  (52,0)   .0000
Influence score for  (72,0) ->  (52,0)   .0000
Influence score for  (25,0) ->  (52,0)   -.0556
Influence score for  (84,0) ->  (53,0)   .2169
Influence score for  (65,0) ->  (53,0)   .2303
Influence score for  (71,0) ->  (54,0)   .3936
Influence score for  (49,0) ->  (54,0)   -.1664
Influence score for  (67,0) ->  (55,0)   .0000
Influence score for  (33,0) ->  (55,0)   .0000
Influence score for  (44,0) ->  (56,0)   .0000
Influence score for   (4,0) ->  (56,0)   .0000
Influence score for  (78,0) ->  (57,0)   .1868
Influence score for   (5,0) ->  (57,0)   .0000
Influence score for  (98,0) ->  (58,0)   .0000
Influence score for  (23,0) ->  (59,0)   .0000
Influence score for   (9,0) ->  (59,0)   .0000
Influence score for  (97,0) ->  (61,0)   .0000
Influence score for  (69,0) ->  (61,0)   .0000
Influence score for  (13,0) ->  (61,0)   .0000
Influence score for  (49,0) ->  (62,0)   .0000
Influence score for  (19,0) ->  (62,0)   .0000
Influence score for   (5,0) ->  (62,0)   -.0556
Influence score for  (84,0) ->  (63,0)   .2322
Influence score for  (67,0) ->  (63,0)   .0921
Influence score for   (2,0) ->  (63,0)   .0000
Influence score for  (88,0) ->  (64,0)   .0000
Influence score for  (13,0) ->  (64,0)   -.1611
Influence score for  (89,0) ->  (65,0)   .0000
Influence score for  (84,0) ->  (65,0)   .1826
Influence score for  (90,0) ->  (66,0)   .0000
Influence score for  (68,0) ->  (66,0)   .1601
Influence score for  (45,0) ->  (67,0)   .0000
Influence score for  (39,0) ->  (67,0)   .0000
Influence score for  (60,0) ->  (68,0)   .0886
Influence score for   (6,0) ->  (68,0)   -.1623
Influence score for  (81,0) ->  (69,0)   .0000
Influence score for  (45,0) ->  (69,0)   .3167
Influence score for  (45,0) ->  (70,0)   .0000
Influence score for   (4,0) ->  (70,0)   .2485
Influence score for  (46,0) ->  (71,0)   -.1664
Influence score for  (20,0) ->  (71,0)   .0000
Influence score for  (15,0) ->  (72,0)   .0000
Influence score for   (3,0) ->  (72,0)   .0000
Influence score for  (45,0) ->  (73,0)   -.2543
Influence score for  (79,0) ->  (74,0)   .0000
Influence score for  (78,0) ->  (74,0)   .1622
Influence score for  (86,0) ->  (75,0)   .0000
Influence score for  (84,0) ->  (75,0)   .1878
Influence score for  (44,0) ->  (75,0)   .0000
Influence score for   (100,0) ->  (76,0)   -.0833
Influence score for  (94,0) ->  (76,0)   .1667
Influence score for  (84,0) ->  (76,0)   .1743
Influence score for  (90,0) ->  (77,0)   .0000
Influence score for  (52,0) ->  (77,0)   .0000
Influence score for  (98,0) ->  (78,0)   .0000
Influence score for  (54,0) ->  (79,0)   .0000
Influence score for  (27,0) ->  (79,0)   .0000
Influence score for  (82,0) ->  (80,0)   .0000
Influence score for  (19,0) ->  (80,0)   .0000
Influence score for  (86,0) ->  (81,0)   .0000
Influence score for  (28,0) ->  (81,0)   -.0143
Influence score for   (6,0) ->  (81,0)   .0000
Influence score for  (53,0) ->  (82,0)   .1489
Influence score for  (33,0) ->  (82,0)   .0000
Influence score for  (45,0) ->  (83,0)   -.1169
Influence score for  (33,0) ->  (83,0)   .0000
Influence score for  (99,0) ->  (84,0)   .0000
Influence score for   (7,0) ->  (84,0)   .0000
Influence score for  (76,0) ->  (85,0)   .0000
Influence score for  (45,0) ->  (85,0)   .0000
Influence score for  (98,0) ->  (86,0)   .0000
Influence score for  (71,0) ->  (86,0)   .0000
Influence score for  (19,0) ->  (87,0)   .0000
Influence score for   (3,0) ->  (87,0)   .0000
Influence score for  (84,0) ->  (88,0)   .2475
Influence score for  (12,0) ->  (88,0)   -.0259
Influence score for   (1,0) ->  (88,0)   .0833
Influence score for  (20,0) ->  (89,0)   .0000
Influence score for  (14,0) ->  (89,0)   .0000
Influence score for  (79,0) ->  (90,0)   .0000
Influence score for  (48,0) ->  (90,0)   -.1939
Influence score for  (63,0) ->  (91,0)   .0000
Influence score for  (62,0) ->  (91,0)   .0000
Influence score for  (56,0) ->  (91,0)   .0000
Influence score for  (39,0) ->  (91,0)   -.0184
Influence score for  (88,0) ->  (92,0)   .0556
Influence score for  (86,0) ->  (92,0)   -.0556
Influence score for  (54,0) ->  (92,0)   .0000
Influence score for  (98,0) ->  (93,0)   .0000
Influence score for  (11,0) ->  (94,0)   .0000
Influence score for   (5,0) ->  (94,0)   -.1639
Influence score for   (100,0) ->  (95,0)   .1014
Influence score for  (99,0) ->  (95,0)   .1089
Influence score for  (50,0) ->  (95,0)   .0000
Influence score for  (20,0) ->  (96,0)   -.4220
Influence score for  (94,0) ->  (97,0)   .0000
Influence score for  (84,0) ->  (97,0)   .2038
Influence score for   (2,0) ->  (97,0)   .0000
Influence score for  (87,0) ->  (98,0)   .0000
Influence score for  (54,0) ->  (98,0)   .0000
Influence score for  (68,0) ->  (99,0)   .0000
Influence score for  (84,0) ->   (100,0)   .1678
Influence score for  (68,0) ->   (100,0)   .2058

-----------------------------------------------------------------------------
- Post-processing                                  DOT graphics format output
-----------------------------------------------------------------------------

digraph abstract { 

label = "Banjo Version 2.2.0\nHigh scoring network, score: -12583.2209\nProject: Fall 2019\nUser: Bernardo Jordan\nDataset: CaseControlGrade100Genes"; 
labeljust="l"; 

    0 [label="DiseaseGrade"];
    1 [label="RAVER2"];
    2 [label="YAF2"];
    3 [label="TRPC3"];
    4 [label="ZNF7"];
    5 [label="PARD6B"];
    6 [label="CYP4F8"];
    7 [label="ABCD2"];
    8 [label="NIPSNAP3B"];
    9 [label="CA8"];
    10 [label="EFHC2"];
    11 [label="CXCL5"];
    12 [label="MATN3"];
    13 [label="TLL1"];
    14 [label="MYO1D"];
    15 [label="GALR2"];
    16 [label="SIDT1"];
    17 [label="SIM1"];
    18 [label="PLCH1"];
    19 [label="MSX2"];
    20 [label="ZNF442"];
    21 [label="GREM2"];
    22 [label="CDH9"];
    23 [label="ADRA1B"];
    24 [label="EGF"];
    25 [label="MMP10"];
    26 [label="ZNF165"];
    27 [label="ZNF257"];
    28 [label="DRD1"];
    29 [label="TSPAN2"];
    30 [label="FCER1A"];
    31 [label="VGLL3"];
    32 [label="TRPC6"];
    33 [label="IL7"];
    34 [label="CNTN6"];
    35 [label="PLA2G1B"];
    36 [label="PTGER2"];
    37 [label="LGALS13"];
    38 [label="SH3TC2"];
    39 [label="ASCL2"];
    40 [label="CORIN"];
    41 [label="DPYS"];
    42 [label="PRDM13"];
    43 [label="HOOK1"];
    44 [label="ADAMTS20"];
    45 [label="BRCA2"];
    46 [label="CCDC69"];
    47 [label="INHBE"];
    48 [label="NFE2L3"];
    49 [label="CYP2B6"];
    50 [label="XYLB"];
    51 [label="MRC2"];
    52 [label="SEMA4C"];
    53 [label="SMYD3"];
    54 [label="RAB3IL1"];
    55 [label="MRPS14"];
    56 [label="PAF1"];
    57 [label="KIF13B"];
    58 [label="SLC25A12"];
    59 [label="ADIPOR2"];
    60 [label="DGKD"];
    61 [label="NUPL2"];
    62 [label="ACTR1A"];
    63 [label="PITPNA"];
    64 [label="SNF8"];
    65 [label="SECISBP2"];
    66 [label="TARBP1"];
    67 [label="ARHGEF17"];
    68 [label="KIF3B"];
    69 [label="TSPYL2"];
    70 [label="VAPB"];
    71 [label="TAF2"];
    72 [label="GOLGB1"];
    73 [label="SLC25A1"];
    74 [label="TBC1D5"];
    75 [label="PMF1"];
    76 [label="LHFPL2"];
    77 [label="ELP3"];
    78 [label="RHOG"];
    79 [label="CCDC25"];
    80 [label="CLK2"];
    81 [label="FAM57A"];
    82 [label="CYP27A1"];
    83 [label="METAP1"];
    84 [label="TEX261"];
    85 [label="DPAGT1"];
    86 [label="STX18"];
    87 [label="PLCD1"];
    88 [label="TMEM109"];
    89 [label="TTC1"];
    90 [label="OXA1L"];
    91 [label="ST5"];
    92 [label="TRIM26"];
    93 [label="YIPF1"];
    94 [label="GAB2"];
    95 [label="NPLOC4"];
    96 [label="VPS33B"];
    97 [label="FBXW4"];
    98 [label="MPPE1"];
    99 [label="DUSP14"];
    100 [label="FMO4"];

    14->0;
    20->0;
    47->0;
    7->1;
    11->1;
    45->2;
    49->2;
    38->3;
    53->3;
    54->3;
    84->3;
    52->4;
    94->4;
    80->5;
    95->5;
    22->6;
    60->6;
    19->7;
    38->7;
    0->8;
    50->8;
    14->9;
    98->9;
    64->10;
    6->11;
    43->12;
    89->12;
    12->13;
    40->13;
    43->13;
    84->13;
    11->14;
    21->14;
    32->15;
    36->15;
    90->15;
    69->16;
    90->16;
    2->17;
    7->17;
    46->17;
    21->18;
    94->18;
    50->19;
    60->19;
    95->20;
    7->21;
    43->21;
    19->22;
    21->23;
    24->23;
    45->23;
    18->24;
    40->24;
    17->25;
    43->25;
    13->26;
    84->26;
    6->27;
    68->27;
    43->28;
    45->28;
    48->28;
    5->29;
    44->29;
    46->29;
    13->30;
    67->30;
    8->31;
    70->31;
    6->32;
    22->32;
    6->33;
    43->33;
    84->33;
    28->34;
    95->34;
    28->35;
    47->35;
    82->35;
    22->36;
    39->36;
    44->36;
    19->37;
    36->37;
    27->38;
    40->38;
    11->39;
    27->39;
    19->40;
    44->41;
    19->42;
    55->42;
    22->43;
    25->44;
    42->44;
    94->44;
    50->45;
    94->45;
    18->46;
    42->46;
    23->47;
    60->47;
    98->47;
    1->48;
    42->48;
    55->48;
    7->49;
    83->49;
    84->49;
    60->50;
    33->51;
    87->51;
    25->52;
    72->52;
    97->52;
    65->53;
    84->53;
    49->54;
    71->54;
    33->55;
    67->55;
    4->56;
    44->56;
    5->57;
    78->57;
    98->58;
    9->59;
    23->59;
    13->61;
    69->61;
    97->61;
    5->62;
    19->62;
    49->62;
    2->63;
    67->63;
    84->63;
    13->64;
    88->64;
    84->65;
    89->65;
    68->66;
    90->66;
    39->67;
    45->67;
    6->68;
    60->68;
    45->69;
    81->69;
    4->70;
    45->70;
    20->71;
    46->71;
    3->72;
    15->72;
    45->73;
    78->74;
    79->74;
    44->75;
    84->75;
    86->75;
    84->76;
    94->76;
    100->76;
    52->77;
    90->77;
    98->78;
    27->79;
    54->79;
    19->80;
    82->80;
    6->81;
    28->81;
    86->81;
    33->82;
    53->82;
    33->83;
    45->83;
    7->84;
    99->84;
    45->85;
    76->85;
    71->86;
    98->86;
    3->87;
    19->87;
    1->88;
    12->88;
    84->88;
    14->89;
    20->89;
    48->90;
    79->90;
    39->91;
    56->91;
    62->91;
    63->91;
    54->92;
    86->92;
    88->92;
    98->93;
    5->94;
    11->94;
    50->95;
    99->95;
    100->95;
    20->96;
    2->97;
    84->97;
    94->97;
    54->98;
    87->98;
    68->99;
    68->100;
    84->100;
}

-----------------------------------------------------------------------------
- Banjo                        Bayesian Network Inference with Java Objects -
- Release 2.2.0                                                 15 Apr 2008 -
- Licensed from Duke University                                             -
- Copyright (c) 2005-08 by Alexander J. Hartemink                           -
- All rights reserved                                                       -
-----------------------------------------------------------------------------
- Project:                                                          Fall 2019
- User:                                                       Bernardo Jordan
- Dataset:                                           CaseControlGrade100Genes
- Notes:                                                          16 Hour Run
-----------------------------------------------------------------------------
- Settings file:                                                             
-----------------------------------------------------------------------------
- Input directory:                                         data/project/input
- Observations file:                                      CCGrade100Genes.txt
- Observation count:                                                      572
- Number of variables:                                                    101
- Variable names:                                                      inFile
- Discretization policy:                                                 none
- Exceptions to the discretization policy:                               none
-----------------------------------------------------------------------------
- Initial structure file:                                                    
- 'Must be present' edges file:                                              
- 'Must not be present' edges file:                                          
- Min. Markov lag:                                                          0
- Max. Markov lag:                                                          0
- Max. parent count:                                                        5
- Equivalent sample size for Dirichlet parameter prior:                   1.0
-----------------------------------------------------------------------------
- Searcher:                                                    SearcherGreedy
- Proposer:                                           ProposerRandomLocalMove
- Evaluator:                                        defaulted to EvaluatorBDe
- Decider:                                         defaulted to DeciderGreedy
-----------------------------------------------------------------------------
- Pre-compute logGamma:                                                   yes
- Cache:                                                           fastLevel2
- Cycle checking method:                                   Depth-first Search
-----------------------------------------------------------------------------
- Min. proposed networks after high score:                               1000
- Min. proposed networks before restart:                                 3000
- Max. proposed networks before restart:                                 5000
- Restart method:                                          use random network
-   with max. parent count:                                                 3
-----------------------------------------------------------------------------
- Output directory:                                       data/project/output
- Report file:                                                     report.txt
- Number of best networks tracked:                                          1
- Max. time:                                                           16.0 h
- Max. restarts:                                                        10000
- Min. networks before checking:                                         1000
- Screen reporting interval:                                           20.0 s
- File reporting interval:                                             10.0 m
-----------------------------------------------------------------------------
- Compute influence scores:                                               yes
- Compute consensus graph:                                                yes
- Create consensus graph as HTML:                                         yes
- Create 'dot' output:                                                    yes
- Location of 'dot':          C:/Program Files (x86)/Graphviz2.38/bin/dot.exe
-----------------------------------------------------------------------------
- XML output directory:                                   data/project/output
- XML Report file:                                                           
- XML settings to export:                                                    
- XML parser:                             org.apache.xerces.parsers.SAXParser
- Banjo XML format version:                                               1.0
-----------------------------------------------------------------------------
- Seed for starting search:                                     1574561065422
-----------------------------------------------------------------------------
- Number of threads:                                                        1
-----------------------------------------------------------------------------

Memory info before starting the search: Banjo is using 18 mb of memory
Prep. time used: 161.0 ms
Beginning to search: expect a status report every 20.0 s

Status:  Networks 1699000
         Time     20.0 s (0.0% of max. 16.0 h)
         Restarts 339 (3.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 3435000
         Time     40.01 s (0.0% of max. 16.0 h)
         Restarts 686 (6.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 5194000
         Time     1.0 m (0.1% of max. 16.0 h)
         Restarts 1038 (10.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 6962000
         Time     1.33 m (0.1% of max. 16.0 h)
         Restarts 1392 (13.9% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 8738000
         Time     1.67 m (0.1% of max. 16.0 h)
         Restarts 1747 (17.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 10512000
         Time     2.0 m (0.2% of max. 16.0 h)
         Restarts 2102 (21.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 12296000
         Time     2.33 m (0.2% of max. 16.0 h)
         Restarts 2458 (24.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 14082000
         Time     2.67 m (0.2% of max. 16.0 h)
         Restarts 2816 (28.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 15866000
         Time     3.0 m (0.3% of max. 16.0 h)
         Restarts 3172 (31.7% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 17653000
         Time     3.33 m (0.3% of max. 16.0 h)
         Restarts 3530 (35.3% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 19441000
         Time     3.67 m (0.3% of max. 16.0 h)
         Restarts 3887 (38.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 21233000
         Time     4.0 m (0.4% of max. 16.0 h)
         Restarts 4246 (42.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 23016000
         Time     4.33 m (0.4% of max. 16.0 h)
         Restarts 4602 (46.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 24802000
         Time     4.67 m (0.4% of max. 16.0 h)
         Restarts 4960 (49.6% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 26577000
         Time     5.0 m (0.5% of max. 16.0 h)
         Restarts 5315 (53.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 28366000
         Time     5.33 m (0.5% of max. 16.0 h)
         Restarts 5672 (56.7% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 30149000
         Time     5.67 m (0.5% of max. 16.0 h)
         Restarts 6029 (60.2% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 31938000
         Time     6.0 m (0.6% of max. 16.0 h)
         Restarts 6387 (63.8% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 33722000
         Time     6.33 m (0.6% of max. 16.0 h)
         Restarts 6744 (67.4% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 35508000
         Time     6.67 m (0.6% of max. 16.0 h)
         Restarts 7101 (71.0% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 37293000
         Time     7.0 m (0.7% of max. 16.0 h)
         Restarts 7458 (74.5% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 39077000
         Time     7.33 m (0.7% of max. 16.0 h)
         Restarts 7815 (78.1% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 40864000
         Time     7.67 m (0.7% of max. 16.0 h)
         Restarts 8172 (81.7% of max. 10000)
         Banjo is using 22 mb of memory

Status:  Networks 42644000
         Time     8.0 m (0.8% of max. 16.0 h)
         Restarts 8528 (85.2% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 44430000
         Time     8.33 m (0.8% of max. 16.0 h)
         Restarts 8885 (88.8% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 46215000
         Time     8.67 m (0.9% of max. 16.0 h)
         Restarts 9242 (92.4% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 48001000
         Time     9.0 m (0.9% of max. 16.0 h)
         Restarts 9599 (95.9% of max. 10000)
         Banjo is using 23 mb of memory

Status:  Networks 49787000
         Time     9.33 m (0.9% of max. 16.0 h)
         Restarts 9957 (99.5% of max. 10000)
         Banjo is using 23 mb of memory



-----------------------------------------------------------------------------
- Final report                                           Best network overall
-----------------------------------------------------------------------------


Network score: -12581.7458, first found at iteration 33006000
101
  0 3 17 18 79
  1 2 3 64
  2 2 33 52
  3 3 0 50 59
  4 2 68 95
  5 2 18 54
  6 3 28 36 79
  7 2 41 95
  8 4 32 45 59 84
  9 2 60 90
 10 2 35 95
 11 3 27 46 51
 12 2 27 89
 13 2 14 76
 14 3 27 64 80
 15 4 17 22 32 54
 16 1 49
 17 2 64 89
 18 2 7 40
 19 2 32 34
 20 2 27 95
 21 2 32 44
 22 2 13 19
 23 2 14 68
 24 1 44
 25 2 21 48
 26 2 27 29
 27 1 89
 28 2 43 44
 29 3 37 69 100
 30 2 5 12
 31 2 17 74
 32 2 48 64
 33 3 7 64 100
 34 2 14 86
 35 2 28 89
 36 2 44 46
 37 2 28 75
 38 2 26 50
 39 2 43 68
 40 2 21 44
 41 2 21 25
 42 2 14 25
 43 2 21 41
 44 2 11 19
 45 2 84 95
 46 1 14
 47 2 41 72
 48 1 65
 49 2 4 89
 50 2 20 60
 51 2 14 95
 52 2 47 70
 53 2 3 43
 54 3 55 79 84
 55 3 4 32 58
 56 2 49 68
 57 2 54 59
 58 2 45 61
 59 2 0 6
 60 2 18 71
 61 2 60 86
 62 2 92 94
 63 2 49 88
 64 0
 65 2 14 27
 66 2 42 90
 67 2 23 54
 68 2 27 78
 69 3 21 45 67
 70 3 35 75 78
 71 2 49 68
 72 2 14 90
 73 1 84
 74 2 15 86
 75 4 15 57 67 68
 76 1 98
 77 2 5 15
 78 1 89
 79 3 19 20 95
 80 2 68 71
 81 2 59 79
 82 2 13 90
 83 2 2 54
 84 2 42 49
 85 1 54
 86 2 49 96
 87 3 50 77 100
 88 3 60 70 82
 89 1 64
 90 3 20 48 98
 91 3 0 6 40
 92 2 67 79
 93 2 35 69
 94 2 55 68
 95 2 27 78
 96 1 95
 97 2 27 48
 98 3 20 53 80
 99 2 33 54
100 4 41 75 81 97


-----------------------------------------------------------------------------
- Search Statistics                                                          
-----------------------------------------------------------------------------

Statistics collected in searcher 'SearcherGreedy':
  Number of networks examined: 50001000
  Total time used: 9.37 m
  High score: -12581.7458, first found at iteration 33006000
  Number of restarts: 10000

Statistics collected in proposer 'ProposerRandomLocalMove':
  Additions -- proposed:    16657329
  Deletions -- proposed:    16682439
  Reversals -- proposed:    16661231

Statistics collected in cycle checker 'CycleCheckerCheckThenApply':
  Additions -- considered:  16657329,  acyclic:  11497420
  Deletions -- no cyclicity test necessary
  Reversals -- considered:  16661231,  acyclic:  11255429

Statistics collected in evaluator 'EvaluatorBDe':
  Scores computed:          16322762
  Scores (cache)            placed         fetched        
      with 0 parents:       101            3227369        
      with 1 parents:       10100          17303840       
      with 2 parents:       492851         11229186       
      with 3 parents:       11709415       3173858        
      with 4 parents:       3781494        878024         
      with 5 parents:       328801         68831          

Statistics collected in decider 'DeciderGreedy':
  Additions -- considered:  11497420,  better score:  1739349
  Deletions -- considered:  16682439,  better score:  1391872
  Reversals -- considered:  11255429,  better score:  764098

Memory info after completing the search: Banjo is using 23 mb of memory


Network score: -12581.7458, found by thread 1
101
  0 3 17 18 79
  1 2 3 64
  2 2 33 52
  3 3 0 50 59
  4 2 68 95
  5 2 18 54
  6 3 28 36 79
  7 2 41 95
  8 4 32 45 59 84
  9 2 60 90
 10 2 35 95
 11 3 27 46 51
 12 2 27 89
 13 2 14 76
 14 3 27 64 80
 15 4 17 22 32 54
 16 1 49
 17 2 64 89
 18 2 7 40
 19 2 32 34
 20 2 27 95
 21 2 32 44
 22 2 13 19
 23 2 14 68
 24 1 44
 25 2 21 48
 26 2 27 29
 27 1 89
 28 2 43 44
 29 3 37 69 100
 30 2 5 12
 31 2 17 74
 32 2 48 64
 33 3 7 64 100
 34 2 14 86
 35 2 28 89
 36 2 44 46
 37 2 28 75
 38 2 26 50
 39 2 43 68
 40 2 21 44
 41 2 21 25
 42 2 14 25
 43 2 21 41
 44 2 11 19
 45 2 84 95
 46 1 14
 47 2 41 72
 48 1 65
 49 2 4 89
 50 2 20 60
 51 2 14 95
 52 2 47 70
 53 2 3 43
 54 3 55 79 84
 55 3 4 32 58
 56 2 49 68
 57 2 54 59
 58 2 45 61
 59 2 0 6
 60 2 18 71
 61 2 60 86
 62 2 92 94
 63 2 49 88
 64 0
 65 2 14 27
 66 2 42 90
 67 2 23 54
 68 2 27 78
 69 3 21 45 67
 70 3 35 75 78
 71 2 49 68
 72 2 14 90
 73 1 84
 74 2 15 86
 75 4 15 57 67 68
 76 1 98
 77 2 5 15
 78 1 89
 79 3 19 20 95
 80 2 68 71
 81 2 59 79
 82 2 13 90
 83 2 2 54
 84 2 42 49
 85 1 54
 86 2 49 96
 87 3 50 77 100
 88 3 60 70 82
 89 1 64
 90 3 20 48 98
 91 3 0 6 40
 92 2 67 79
 93 2 35 69
 94 2 55 68
 95 2 27 78
 96 1 95
 97 2 27 48
 98 3 20 53 80
 99 2 33 54
100 4 41 75 81 97

-----------------------------------------------------------------------------
- Post-processing                                            Influence scores
-----------------------------------------------------------------------------

Influence score for  (79,0) ->   (0,0)   -.1479
Influence score for  (18,0) ->   (0,0)   .0334
Influence score for  (17,0) ->   (0,0)   .1004
Influence score for  (64,0) ->   (1,0)   -.3120
Influence score for   (3,0) ->   (1,0)   .1454
Influence score for  (52,0) ->   (2,0)   -.3189
Influence score for  (33,0) ->   (2,0)   .1522
Influence score for  (59,0) ->   (3,0)   .0000
Influence score for  (50,0) ->   (3,0)   .0667
Influence score for   (0,0) ->   (3,0)   .0000
Influence score for  (95,0) ->   (4,0)   -.1757
Influence score for  (68,0) ->   (4,0)   -.2305
Influence score for  (54,0) ->   (5,0)   -.3141
Influence score for  (18,0) ->   (5,0)   -.1667
Influence score for  (79,0) ->   (6,0)   -.1666
Influence score for  (36,0) ->   (6,0)   .4063
Influence score for  (28,0) ->   (6,0)   -.0145
Influence score for  (95,0) ->   (7,0)   -.1527
Influence score for  (41,0) ->   (7,0)   .0000
Influence score for  (84,0) ->   (8,0)   .1667
Influence score for  (59,0) ->   (8,0)   -.0713
Influence score for  (45,0) ->   (8,0)   .0000
Influence score for  (32,0) ->   (8,0)   -.0273
Influence score for  (90,0) ->   (9,0)   -.3228
Influence score for  (60,0) ->   (9,0)   -.3228
Influence score for  (95,0) ->  (10,0)   .0599
Influence score for  (35,0) ->  (10,0)   .3889
Influence score for  (51,0) ->  (11,0)   -.1220
Influence score for  (46,0) ->  (11,0)   .1088
Influence score for  (27,0) ->  (11,0)   .0000
Influence score for  (89,0) ->  (12,0)   -.3189
Influence score for  (27,0) ->  (12,0)   .0000
Influence score for  (76,0) ->  (13,0)   -.3331
Influence score for  (14,0) ->  (13,0)   .3331
Influence score for  (80,0) ->  (14,0)   -.1111
Influence score for  (64,0) ->  (14,0)   -.1665
Influence score for  (27,0) ->  (14,0)   .2213
Influence score for  (54,0) ->  (15,0)   -.0925
Influence score for  (32,0) ->  (15,0)   .0370
Influence score for  (22,0) ->  (15,0)   .1404
Influence score for  (17,0) ->  (15,0)   .0740
Influence score for  (49,0) ->  (16,0)   .0000
Influence score for  (89,0) ->  (17,0)   -.3268
Influence score for  (64,0) ->  (17,0)   .0000
Influence score for  (40,0) ->  (18,0)   .4894
Influence score for   (7,0) ->  (18,0)   .3002
Influence score for  (34,0) ->  (19,0)   .5474
Influence score for  (32,0) ->  (19,0)   .1069
Influence score for  (95,0) ->  (20,0)   -.0531
Influence score for  (27,0) ->  (20,0)   .6318
Influence score for  (44,0) ->  (21,0)   .3192
Influence score for  (32,0) ->  (21,0)   .1526
Influence score for  (19,0) ->  (22,0)   .3258
Influence score for  (13,0) ->  (22,0)   .4722
Influence score for  (68,0) ->  (23,0)   -.3331
Influence score for  (14,0) ->  (23,0)   .0000
Influence score for  (44,0) ->  (24,0)   .0000
Influence score for  (48,0) ->  (25,0)   .1620
Influence score for  (21,0) ->  (25,0)   .3286
Influence score for  (29,0) ->  (26,0)   .3112
Influence score for  (27,0) ->  (26,0)   .0000
Influence score for  (89,0) ->  (27,0)   .0000
Influence score for  (44,0) ->  (28,0)   .4291
Influence score for  (43,0) ->  (28,0)   .2782
Influence score for   (100,0) ->  (29,0)   .0000
Influence score for  (69,0) ->  (29,0)   -.1109
Influence score for  (37,0) ->  (29,0)   .0000
Influence score for  (12,0) ->  (30,0)   .1611
Influence score for   (5,0) ->  (30,0)   .2400
Influence score for  (74,0) ->  (31,0)   -.3286
Influence score for  (17,0) ->  (31,0)   .3286
Influence score for  (64,0) ->  (32,0)   -.4452
Influence score for  (48,0) ->  (32,0)   -.1613
Influence score for   (100,0) ->  (33,0)   -.0555
Influence score for  (64,0) ->  (33,0)   -.3326
Influence score for   (7,0) ->  (33,0)   .2607
Influence score for  (86,0) ->  (34,0)   -.3310
Influence score for  (14,0) ->  (34,0)   .4365
Influence score for  (89,0) ->  (35,0)   -.9908
Influence score for  (28,0) ->  (35,0)   -.1184
Influence score for  (46,0) ->  (36,0)   .3289
Influence score for  (44,0) ->  (36,0)   .3289
Influence score for  (75,0) ->  (37,0)   -.9414
Influence score for  (28,0) ->  (37,0)   -.0203
Influence score for  (50,0) ->  (38,0)   .3267
Influence score for  (26,0) ->  (38,0)   .0000
Influence score for  (68,0) ->  (39,0)   -.1334
Influence score for  (43,0) ->  (39,0)   .4868
Influence score for  (44,0) ->  (40,0)   .3262
Influence score for  (21,0) ->  (40,0)   .4289
Influence score for  (25,0) ->  (41,0)   .3156
Influence score for  (21,0) ->  (41,0)   .3156
Influence score for  (25,0) ->  (42,0)   .0000
Influence score for  (14,0) ->  (42,0)   .2995
Influence score for  (41,0) ->  (43,0)   .3276
Influence score for  (21,0) ->  (43,0)   .5050
Influence score for  (19,0) ->  (44,0)   .6436
Influence score for  (11,0) ->  (44,0)   .0000
Influence score for  (95,0) ->  (45,0)   .0055
Influence score for  (84,0) ->  (45,0)   -.4906
Influence score for  (14,0) ->  (46,0)   .0000
Influence score for  (72,0) ->  (47,0)   -.2117
Influence score for  (41,0) ->  (47,0)   .1440
Influence score for  (65,0) ->  (48,0)   -.6550
Influence score for  (89,0) ->  (49,0)   .0000
Influence score for   (4,0) ->  (49,0)   .3331
Influence score for  (60,0) ->  (50,0)   -.4910
Influence score for  (20,0) ->  (50,0)   .1664
Influence score for  (95,0) ->  (51,0)   .2633
Influence score for  (14,0) ->  (51,0)   -.1241
Influence score for  (70,0) ->  (52,0)   .0423
Influence score for  (47,0) ->  (52,0)   .0000
Influence score for  (43,0) ->  (53,0)   .0000
Influence score for   (3,0) ->  (53,0)   .0000
Influence score for  (84,0) ->  (54,0)   .1361
Influence score for  (79,0) ->  (54,0)   .0000
Influence score for  (55,0) ->  (54,0)   .0288
Influence score for  (58,0) ->  (55,0)   .0000
Influence score for  (32,0) ->  (55,0)   -.0555
Influence score for   (4,0) ->  (55,0)   .0000
Influence score for  (68,0) ->  (56,0)   .0000
Influence score for  (49,0) ->  (56,0)   .0000
Influence score for  (59,0) ->  (57,0)   .0000
Influence score for  (54,0) ->  (57,0)   .0923
Influence score for  (61,0) ->  (58,0)   .0000
Influence score for  (45,0) ->  (58,0)   .0000
Influence score for   (6,0) ->  (59,0)   .0000
Influence score for   (0,0) ->  (59,0)   .0000
Influence score for  (71,0) ->  (60,0)   .0368
Influence score for  (18,0) ->  (60,0)   -.3164
Influence score for  (86,0) ->  (61,0)   .0000
Influence score for  (60,0) ->  (61,0)   .0000
Influence score for  (94,0) ->  (62,0)   .0000
Influence score for  (92,0) ->  (62,0)   .0000
Influence score for  (88,0) ->  (63,0)   .0000
Influence score for  (49,0) ->  (63,0)   .0000
Influence score for  (27,0) ->  (65,0)   .0000
Influence score for  (14,0) ->  (65,0)   .0000
Influence score for  (90,0) ->  (66,0)   .0000
Influence score for  (42,0) ->  (66,0)   -.1592
Influence score for  (54,0) ->  (67,0)   .0000
Influence score for  (23,0) ->  (67,0)   .0000
Influence score for  (78,0) ->  (68,0)   .0000
Influence score for  (27,0) ->  (68,0)   .0000
Influence score for  (67,0) ->  (69,0)   .0807
Influence score for  (45,0) ->  (69,0)   .0339
Influence score for  (21,0) ->  (69,0)   .1647
Influence score for  (78,0) ->  (70,0)   .0407
Influence score for  (75,0) ->  (70,0)   .0689
Influence score for  (35,0) ->  (70,0)   .0000
Influence score for  (68,0) ->  (71,0)   .0000
Influence score for  (49,0) ->  (71,0)   .0000
Influence score for  (90,0) ->  (72,0)   .0000
Influence score for  (14,0) ->  (72,0)   .0000
Influence score for  (84,0) ->  (73,0)   .2424
Influence score for  (86,0) ->  (74,0)   .0000
Influence score for  (15,0) ->  (74,0)   .0000
Influence score for  (68,0) ->  (75,0)   .0000
Influence score for  (67,0) ->  (75,0)   .0185
Influence score for  (57,0) ->  (75,0)   .0000
Influence score for  (15,0) ->  (75,0)   .0185
Influence score for  (98,0) ->  (76,0)   .0000
Influence score for  (15,0) ->  (77,0)   .1185
Influence score for   (5,0) ->  (77,0)   -.1593
Influence score for  (89,0) ->  (78,0)   .0000
Influence score for  (95,0) ->  (79,0)   .1582
Influence score for  (20,0) ->  (79,0)   .0000
Influence score for  (19,0) ->  (79,0)   .0000
Influence score for  (71,0) ->  (80,0)   .0000
Influence score for  (68,0) ->  (80,0)   .2316
Influence score for  (79,0) ->  (81,0)   .0000
Influence score for  (59,0) ->  (81,0)   .0199
Influence score for  (90,0) ->  (82,0)   .0000
Influence score for  (13,0) ->  (82,0)   .0000
Influence score for  (54,0) ->  (83,0)   .0000
Influence score for   (2,0) ->  (83,0)   .0000
Influence score for  (49,0) ->  (84,0)   -.3315
Influence score for  (42,0) ->  (84,0)   .0873
Influence score for  (54,0) ->  (85,0)   .0000
Influence score for  (96,0) ->  (86,0)   .0000
Influence score for  (49,0) ->  (86,0)   -.1578
Influence score for   (100,0) ->  (87,0)   .0000
Influence score for  (77,0) ->  (87,0)   .0000
Influence score for  (50,0) ->  (87,0)   .0000
Influence score for  (82,0) ->  (88,0)   .0000
Influence score for  (70,0) ->  (88,0)   .0000
Influence score for  (60,0) ->  (88,0)   .0000
Influence score for  (64,0) ->  (89,0)   .0000
Influence score for  (98,0) ->  (90,0)   .0000
Influence score for  (48,0) ->  (90,0)   -.0556
Influence score for  (20,0) ->  (90,0)   .0000
Influence score for  (40,0) ->  (91,0)   .0333
Influence score for   (6,0) ->  (91,0)   .0333
Influence score for   (0,0) ->  (91,0)   .0000
Influence score for  (79,0) ->  (92,0)   .0000
Influence score for  (67,0) ->  (92,0)   .1641
Influence score for  (69,0) ->  (93,0)   .0000
Influence score for  (35,0) ->  (93,0)   .0000
Influence score for  (68,0) ->  (94,0)   .0000
Influence score for  (55,0) ->  (94,0)   .0000
Influence score for  (78,0) ->  (95,0)   .0000
Influence score for  (27,0) ->  (95,0)   .0000
Influence score for  (95,0) ->  (96,0)   .4114
Influence score for  (48,0) ->  (97,0)   -.1259
Influence score for  (27,0) ->  (97,0)   .0000
Influence score for  (80,0) ->  (98,0)   .0000
Influence score for  (53,0) ->  (98,0)   .0000
Influence score for  (20,0) ->  (98,0)   .0000
Influence score for  (54,0) ->  (99,0)   .1311
Influence score for  (33,0) ->  (99,0)   .0000
Influence score for  (97,0) ->   (100,0)   .0367
Influence score for  (81,0) ->   (100,0)   -.0552
Influence score for  (75,0) ->   (100,0)   .0000
Influence score for  (41,0) ->   (100,0)   .0000

-----------------------------------------------------------------------------
- Post-processing                                  DOT graphics format output
-----------------------------------------------------------------------------

digraph abstract { 

label = "Banjo Version 2.2.0\nHigh scoring network, score: -12581.7458\nProject: Fall 2019\nUser: Bernardo Jordan\nDataset: CaseControlGrade100Genes"; 
labeljust="l"; 

    0 [label="DiseaseGrade"];
    1 [label="RAVER2"];
    2 [label="YAF2"];
    3 [label="TRPC3"];
    4 [label="ZNF7"];
    5 [label="PARD6B"];
    6 [label="CYP4F8"];
    7 [label="ABCD2"];
    8 [label="NIPSNAP3B"];
    9 [label="CA8"];
    10 [label="EFHC2"];
    11 [label="CXCL5"];
    12 [label="MATN3"];
    13 [label="TLL1"];
    14 [label="MYO1D"];
    15 [label="GALR2"];
    16 [label="SIDT1"];
    17 [label="SIM1"];
    18 [label="PLCH1"];
    19 [label="MSX2"];
    20 [label="ZNF442"];
    21 [label="GREM2"];
    22 [label="CDH9"];
    23 [label="ADRA1B"];
    24 [label="EGF"];
    25 [label="MMP10"];
    26 [label="ZNF165"];
    27 [label="ZNF257"];
    28 [label="DRD1"];
    29 [label="TSPAN2"];
    30 [label="FCER1A"];
    31 [label="VGLL3"];
    32 [label="TRPC6"];
    33 [label="IL7"];
    34 [label="CNTN6"];
    35 [label="PLA2G1B"];
    36 [label="PTGER2"];
    37 [label="LGALS13"];
    38 [label="SH3TC2"];
    39 [label="ASCL2"];
    40 [label="CORIN"];
    41 [label="DPYS"];
    42 [label="PRDM13"];
    43 [label="HOOK1"];
    44 [label="ADAMTS20"];
    45 [label="BRCA2"];
    46 [label="CCDC69"];
    47 [label="INHBE"];
    48 [label="NFE2L3"];
    49 [label="CYP2B6"];
    50 [label="XYLB"];
    51 [label="MRC2"];
    52 [label="SEMA4C"];
    53 [label="SMYD3"];
    54 [label="RAB3IL1"];
    55 [label="MRPS14"];
    56 [label="PAF1"];
    57 [label="KIF13B"];
    58 [label="SLC25A12"];
    59 [label="ADIPOR2"];
    60 [label="DGKD"];
    61 [label="NUPL2"];
    62 [label="ACTR1A"];
    63 [label="PITPNA"];
    64 [label="SNF8"];
    65 [label="SECISBP2"];
    66 [label="TARBP1"];
    67 [label="ARHGEF17"];
    68 [label="KIF3B"];
    69 [label="TSPYL2"];
    70 [label="VAPB"];
    71 [label="TAF2"];
    72 [label="GOLGB1"];
    73 [label="SLC25A1"];
    74 [label="TBC1D5"];
    75 [label="PMF1"];
    76 [label="LHFPL2"];
    77 [label="ELP3"];
    78 [label="RHOG"];
    79 [label="CCDC25"];
    80 [label="CLK2"];
    81 [label="FAM57A"];
    82 [label="CYP27A1"];
    83 [label="METAP1"];
    84 [label="TEX261"];
    85 [label="DPAGT1"];
    86 [label="STX18"];
    87 [label="PLCD1"];
    88 [label="TMEM109"];
    89 [label="TTC1"];
    90 [label="OXA1L"];
    91 [label="ST5"];
    92 [label="TRIM26"];
    93 [label="YIPF1"];
    94 [label="GAB2"];
    95 [label="NPLOC4"];
    96 [label="VPS33B"];
    97 [label="FBXW4"];
    98 [label="MPPE1"];
    99 [label="DUSP14"];
    100 [label="FMO4"];

    17->0;
    18->0;
    79->0;
    3->1;
    64->1;
    33->2;
    52->2;
    0->3;
    50->3;
    59->3;
    68->4;
    95->4;
    18->5;
    54->5;
    28->6;
    36->6;
    79->6;
    41->7;
    95->7;
    32->8;
    45->8;
    59->8;
    84->8;
    60->9;
    90->9;
    35->10;
    95->10;
    27->11;
    46->11;
    51->11;
    27->12;
    89->12;
    14->13;
    76->13;
    27->14;
    64->14;
    80->14;
    17->15;
    22->15;
    32->15;
    54->15;
    49->16;
    64->17;
    89->17;
    7->18;
    40->18;
    32->19;
    34->19;
    27->20;
    95->20;
    32->21;
    44->21;
    13->22;
    19->22;
    14->23;
    68->23;
    44->24;
    21->25;
    48->25;
    27->26;
    29->26;
    89->27;
    43->28;
    44->28;
    37->29;
    69->29;
    100->29;
    5->30;
    12->30;
    17->31;
    74->31;
    48->32;
    64->32;
    7->33;
    64->33;
    100->33;
    14->34;
    86->34;
    28->35;
    89->35;
    44->36;
    46->36;
    28->37;
    75->37;
    26->38;
    50->38;
    43->39;
    68->39;
    21->40;
    44->40;
    21->41;
    25->41;
    14->42;
    25->42;
    21->43;
    41->43;
    11->44;
    19->44;
    84->45;
    95->45;
    14->46;
    41->47;
    72->47;
    65->48;
    4->49;
    89->49;
    20->50;
    60->50;
    14->51;
    95->51;
    47->52;
    70->52;
    3->53;
    43->53;
    55->54;
    79->54;
    84->54;
    4->55;
    32->55;
    58->55;
    49->56;
    68->56;
    54->57;
    59->57;
    45->58;
    61->58;
    0->59;
    6->59;
    18->60;
    71->60;
    60->61;
    86->61;
    92->62;
    94->62;
    49->63;
    88->63;
    14->65;
    27->65;
    42->66;
    90->66;
    23->67;
    54->67;
    27->68;
    78->68;
    21->69;
    45->69;
    67->69;
    35->70;
    75->70;
    78->70;
    49->71;
    68->71;
    14->72;
    90->72;
    84->73;
    15->74;
    86->74;
    15->75;
    57->75;
    67->75;
    68->75;
    98->76;
    5->77;
    15->77;
    89->78;
    19->79;
    20->79;
    95->79;
    68->80;
    71->80;
    59->81;
    79->81;
    13->82;
    90->82;
    2->83;
    54->83;
    42->84;
    49->84;
    54->85;
    49->86;
    96->86;
    50->87;
    77->87;
    100->87;
    60->88;
    70->88;
    82->88;
    64->89;
    20->90;
    48->90;
    98->90;
    0->91;
    6->91;
    40->91;
    67->92;
    79->92;
    35->93;
    69->93;
    55->94;
    68->94;
    27->95;
    78->95;
    95->96;
    27->97;
    48->97;
    20->98;
    53->98;
    80->98;
    33->99;
    54->99;
    41->100;
    75->100;
    81->100;
    97->100;
}

